Rosettaepr: Developing Protein Structure Prediction Methods using Sparse SDSL-EPR Data

被引:0
|
作者
Hirst, Stephanie [1 ]
Alexander, Nathan [1 ]
Kaufmann, Kristian [1 ]
Mchaourab, Hassane [1 ]
Meiler, Jens [1 ]
机构
[1] Vanderbilt Univ, Nashville, TN 37235 USA
关键词
D O I
10.1016/j.bpj.2009.12.2508
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
引用
收藏
页码:461A / 462A
页数:2
相关论文
共 50 条
  • [31] Accurate protein structure modeling using sparse NMR data and homologous structure information
    Thompson, James M.
    Sgourakis, Nikolaos G.
    Liu, Gaohua
    Rossi, Paolo
    Tang, Yuefeng
    Mills, Jeffrey L.
    Szyperski, Thomas
    Montelione, Gaetano T.
    Baker, David
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (25) : 9875 - 9880
  • [32] Enlarging the Panoply of Site-Directed Spin Labeling Electron Paramagnetic Resonance (SDSL-EPR): Sensitive and Selective Spin-Labeling of Tyrosine Using an Isoindoline-Based Nitroxide
    Mileo, Elisabetta
    Etienne, Emilien
    Martinho, Marlene
    Lebrun, Regine
    Roubaud, Valerie
    Tordo, Paul
    Gontero, Brigitte
    Guigliarelli, Bruno
    Marque, Sylvain R. A.
    Belle, Valerie
    BIOCONJUGATE CHEMISTRY, 2013, 24 (06) : 1110 - 1117
  • [33] Protein Secondary Structure Prediction using Large Margin Methods
    Tang, Buzhou
    Wang, Xuan
    Wang, Xiaolong
    PROCEEDINGS OF THE 8TH IEEE/ACIS INTERNATIONAL CONFERENCE ON COMPUTER AND INFORMATION SCIENCE, 2009, : 142 - 146
  • [34] Protein structure prediction and understanding using machine learning methods
    Pan, Y
    2005 IEEE International Conference on Granular Computing, Vols 1 and 2, 2005, : 13 - 13
  • [35] Developing methods of crystal structure and polymorph prediction
    Price, SL
    IMPLICATIONS OF MOLECULAR AND MATERIALS STRUCTURE FOR NEW TECHNOLOGIES, 1999, 360 : 315 - 320
  • [36] Exploring the effects of sparse restraints on protein structure prediction
    Mandalaparthy, Varun
    Sanaboyana, Venkata Ramana
    Rafalia, Hitesh
    Gosavi, Shachi
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2018, 86 (02) : 248 - 262
  • [37] Interpretation of Dipolar EPR Data in Terms of Protein Structure
    Jeschke, Gunnar
    STRUCTURAL INFORMATION FROM SPIN-LABELS AND INTRINSIC PARAMAGNETIC CENTRES IN THE BIOSCIENCES, 2014, 152 : 83 - 120
  • [38] The Structure of Vimentin Linker 1 and Rod 1B Domains Characterized by Site-directed Spin-labeling Electron Paramagnetic Resonance (SDSL-EPR) and X-ray Crystallography
    Aziz, Atya
    Hess, John F.
    Budamagunta, Madhu S.
    Voss, John C.
    Kuzin, Alexandre P.
    Huang, Yuanpeng J.
    Xiao, Rong
    Montelione, Gaetano T.
    FitzGerald, Paul G.
    Hunt, John F.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (34) : 28349 - 28361
  • [39] Using metagenomic data to boost protein structure prediction and discovery
    Hou, Qingzhen
    Pucci, Fabrizio
    Pan, Fengming
    Xue, Fuzhong
    Rooman, Marianne
    Feng, Qiang
    Computational and Structural Biotechnology Journal, 2022, 20 : 434 - 442
  • [40] Using metagenomic data to boost protein structure prediction and discovery
    Hou, Qingzhen
    Pucci, Fabrizio
    Pan, Fengming
    Xue, Fuzhong
    Rooman, Marianne
    Feng, Qiang
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 20 : 434 - 442