The complete chloroplast genome sequence ofSenna toraand phylogenetic analysis

被引：1
|
作者：
Xu, Qing [1 ]
Ma, Lirong [1 ]
Chen, Guo [2 ]
机构：
[1] Northwest Univ, Coll Life Sci, Xian, Peoples R China
[2] Fourth Mil Med Univ, Sch Pharm, Dept Biopharmaceut, Xian, Shaanxi, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词：
S; tora; chloroplast genome; phylogenetic analysis; genetic information;
D O I：
10.1080/23802359.2020.1781573
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete chloroplast genome sequence ofSenna torawas characterized from Illumina pair-end sequencing. The chloroplast genome ofS. torawas 161,050 bp in length, containing a large single-copy region (LSC) of 90,411 bp, a small single-copy region (SSC) of 18,537 bp, and two inverted repeat (IR) regions of 26,050 bp. The overall GC content is 36.20%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.4%, and 60.2%, respectively. The genome contains 129 complete genes, including 8 rRNAs, 37 tRNAs and 84 protein coding genes. The Neighbour-joining phylogenetic analysis showed thatS. toraandS. bicapsularisclustered together as sisters to otherSennaspecies.
引用
收藏
页码：3433 / 3435
页数：3
相关论文
共 50 条
  • [1] Complete chloroplast genome ofSenna spectabilis(DC.) HS Irwin & Barneby (Fabaceae) and phylogenetic analysis
    Shi, Zhaowan
    Shi, Guozheng
    Zhao, Kunkun
    Sun, Bing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2855 - 2856
  • [2] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Aster tataricus
    Shen, Xiaofeng
    Guo, Shuai
    Yin, Yu
    Zhang, Jingjing
    Yin, Xianmei
    Liang, Conglian
    Wang, Zhangwei
    Huang, Bingfeng
    Liu, Yanhong
    Xiao, Shuiming
    Zhu, Guangwei
    MOLECULES, 2018, 23 (10):
  • [3] Complete chloroplast genome sequence and phylogenetic analysis of Spathiphyllum 'Parrish'
    Liu, Xiao-Fei
    Zhu, Gen-Fa
    Li, Dong-Mei
    Wang, Xiao-Jing
    PLOS ONE, 2019, 14 (10):
  • [4] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Paeonia ostii
    Guo, Shuai
    Guo, Lili
    Zhao, Wei
    Xu, Jiang
    Li, Yuying
    Zhang, Xiaoyan
    Shen, Xiaofeng
    Wu, Mingli
    Hou, Xiaogai
    MOLECULES, 2018, 23 (02):
  • [5] Complete chloroplast genome sequence and phylogenetic analysis ofAnnona reticulata
    Niu, Ying-feng
    Li, Kai-Xiong
    Liu, Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3558 - 3560
  • [6] The complete chloroplast genome sequence ofChlorella vulgarisand phylogenetic analysis
    Wen, Yangmin
    Wan, Duanjing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2713 - 2715
  • [7] The complete chloroplast genome sequence of Veratrum oxysepalum and phylogenetic analysis
    Chen, Zi-Jian
    Liu, Jia-Jia
    Zhang, Ying-Min
    Qian, Zi-Gang
    Li, Guo-Dong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2015 - 2016
  • [8] Complete chloroplast genome sequence and phylogenetic analysis of Erysimum cheiranthoides
    Zhang, Qingde
    Du, Yingxue
    Bai, Shangyuan
    Yuan, Wangjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2920 - 2921
  • [9] Complete chloroplast genome sequence and phylogenetic analysis of Torenia fournieri
    Chen, Gang
    Wang, Li-guo
    Wang, Ying-hua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2004 - 2006
  • [10] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Quercus acutissima
    Li, Xuan
    Li, Yongfu
    Zang, Mingyue
    Li, Mingzhi
    Fang, Yanming
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 19 (08)
12345