A new strategy for sequential assignment of intrinsically unstructured proteins based on 15N single isotope labelling

被引:5
|
作者
Lopez, Juan [1 ]
Ahuja, Puneet [1 ]
Gerard, Melanie [2 ]
Wieruszeski, Jean-Michel [1 ]
Lippens, Guy [1 ]
机构
[1] Univ Sci & Technol Lille 1, CNRS, UMR 8576, Unite Glycobiol Struct & Fonct, F-59655 Villeneuve Dascq, France
[2] KU Leuven Kortrijk, Biochem Lab, B-8500 Kortrijk, Flanders, Belgium
关键词
Assignment; Intrinsically unstructured protein; NOESY; TOCSY; RESOLUTION NMR-SPECTROSCOPY; HEPATITIS-C VIRUS; ALPHA-SYNUCLEIN; STRUCTURAL-CHARACTERIZATION; CONFORMATIONAL PROPERTIES; RESONANCE ASSIGNMENT; UNFOLDED PROTEINS; FOLDED PROTEINS; NS5A PROTEIN; PHOSPHORYLATION;
D O I
10.1016/j.jmr.2013.07.007
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We describe a new efficient strategy for the sequential assignment of amide resonances of a conventional N-15-H-1 HSQC spectrum of intrinsically unfolded proteins, based on composite NOESY-TOCSY and TOCSY-NOESY mixing times. These composite mixing times lead to a Hoc-proton mediated unidirectional transfer of amide to amide proton. We have implemented the composite mixing times in an HSQC-NOESY-HSQC manner to obtain directional connectivity between amides of neighbouring residues. We experimentally determine the optimal mixing times for both transfer schemes, and demonstrate its use in the assignment for both a fragment of the neuronal tau protein and for alpha-synuclein. (C) 2013 Elsevier Inc. All rights reserved.
引用
收藏
页码:1 / 6
页数:6
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