Identification of 315 genes essential for early zebrafish development

被引:643
|
作者
Amsterdam, A
Nissen, RM
Sun, ZX
Swindell, EC
Farrington, S
Hopkins, N
机构
[1] MIT, Canc Res Ctr, Cambridge, MA 02139 USA
[2] MIT, Dept Biol, Cambridge, MA 02139 USA
关键词
D O I
10.1073/pnas.0403929101
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We completed a large insertional mutagenesis screen in zebrafish to identify genes essential for embryonic and early larval development. We isolated 525 mutants, representing lesions in approximate to390 different genes, and we cloned the majority of these. Here we describe 315 mutants and the corresponding genes. Our data suggest that there are roughly 1,400 embryonic-essential genes in the fish. Thus, we have mutations in approximate to25% of these genes and have cloned approximate to22% of them. Re-screens of our collection to identify mutants with specific developmental defects suggest that approximate to50 genes are essential for the development of some individual organs or cell types. Seventy-two percent of the embryonic-essential fish genes have homologues in yeast, 93% have homologues in invertebrates (fly or worm), and 99% have homologues in human. Yeast and worm orthologues of genes that are essential for early zebrafish development have a strong tendency to be essential for viability in yeast and for embryonic development in the worm. Thus, the trait of being a genetically essential gene is conserved in evolution. This mutant collection should be a valuable resource for diverse studies of cell and developmental biology.
引用
收藏
页码:12792 / 12797
页数:6
相关论文
共 50 条
  • [21] The isolation and identification of genes active in early human development
    Hurley, J
    Adjaye, J
    Monk, M
    HUMAN REPRODUCTION, 1998, 13 : 128 - 128
  • [22] Identification of early fruit development reference genes in plum
    Galimba, Kelsey
    Tosetti, Roberta
    Loerich, Karen
    Michael, Leann
    Pabhakar, Savita
    Dove, Cynthia
    Dardick, Chris
    Callahan, Ann
    PLOS ONE, 2020, 15 (04):
  • [23] The dlx5a/dlx6a Genes Play Essential Roles in the Early Development of Zebrafish Median Fin and Pectoral Structures
    Heude, Eglantine
    Shaikho, Sarah
    Ekker, Marc
    PLOS ONE, 2014, 9 (05):
  • [24] The Heterochronic Genes lin-28a and lin-28b Play an Essential and Evolutionarily Conserved Role in Early Zebrafish Development
    Ouchi, Yasuo
    Yamamoto, Jyunya
    Iwamoto, Takashi
    PLOS ONE, 2014, 9 (02):
  • [25] Leptin is essential for normal development in zebrafish
    Londraville, Richard Lyle
    Liu, Qin
    FASEB JOURNAL, 2008, 22
  • [26] Identification of essential genes in bacteria
    Hillyard, David R.
    Redd, Michael J.
    ADVANCED BACTERIAL GENETICS: USE OF TRANSPOSONS AND PHAGE FOR GENOMIC ENGIEERING, 2007, 421 : 21 - 34
  • [27] Cloning and characterization of developmentally important genes during early development of zebrafish embryo
    Guo, SD
    Li, SH
    Sun, FZ
    DEVELOPMENTAL BIOLOGY, 1997, 186 (02) : A131 - A131
  • [28] DIFFERENTIAL EXPRESSION OF FORK HEAD GENES DURING EARLY XENOPUS AND ZEBRAFISH DEVELOPMENT
    DIRKSEN, ML
    JAMRICH, M
    DEVELOPMENTAL GENETICS, 1995, 17 (02): : 107 - 116
  • [29] Neuron-specific expression of Scratch genes during early zebrafish development
    Dam, Thi-Minh-Tho
    Kim, Hyun-Taek
    Moon, Hyun-Yi
    Hwang, Kyu-Seok
    Jeong, Yun-Mi
    You, Kwan-Hee
    Lee, Jeong-Soo
    Kim, Cheol-Hee
    MOLECULES AND CELLS, 2011, 31 (05) : 471 - 475
  • [30] Characterization and comparative expression of zebrafish calpain system genes during early development
    Lepage, Stephanie E.
    Bruce, Ashley E. E.
    DEVELOPMENTAL DYNAMICS, 2008, 237 (03) : 819 - 829