Anti-CRISPR proteins: a weapon of phage-bacterial arm race for genome editing

被引:1
|
作者
Jaiswal, Sandeep [1 ]
Singh, Lal Bahadur [2 ]
Kumar, Kuldeep [3 ]
Vijayan, Joshitha [2 ]
Shettigar, Nivedita [1 ]
Jha, Sudhir Kumar [3 ]
Soren, Khela Ram [3 ]
机构
[1] ICAR Res Complex North Eastern Hill Reg, Umiam 793013, Meghalaya, India
[2] ICAR Natl Inst Plant Biotechnol, New Delhi 110012, India
[3] ICAR Indian Inst Pulses Res, Kanpur 208024, Uttar Pradesh, India
来源
NUCLEUS-INDIA | 2024年 / 67卷 / 01期
关键词
CRISPR-Cas; Anti-CRISPR; Genome editing; Acr proteins; Mobile genetic elements; CAS SURVEILLANCE COMPLEX; RNA-GUIDED CAS9; STRUCTURE REVEALS; GENE DRIVE; EVOLUTIONARY CLASSIFICATION; SPACER ACQUISITION; VIRAL SUPPRESSORS; INHIBITION; SYSTEMS; MECHANISMS;
D O I
10.1007/s13237-023-00457-z
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The ongoing evolutionary competition between bacteria and their phage parasites has led to the development of intricate systems of attacks, defenses, and counter-defenses. Among the prokaryotic adaptive immunity measures, the CRISPR-Cas system has garnered significant attention for its versatility in genome editing and other biotechnological applications. In this system, bacteria capture specific sequences from invading phages and store them in their genome as a record. This allows the bacteria to recognize and target the phage DNA for degradation using Cas proteins upon subsequent infections. On the phage side of the battle, a counter mechanism known as 'Anti-CRISPR' (Acr) has emerged. Acr proteins, encoded by phages or Mobile Genetic Elements (MGEs), function to inhibit CRISPR-Cas activity. They achieve this by either blocking DNA binding or inhibiting the cleavage process of the CRISPR-Cas effector complexes. Acrs present the potential to develop regulated and reversible CRISPR-Cas-mediated gene circuits, opening up possibilities for precise genome editing. Researchers are exploring the applications of Acrs to reduce off-target mutations associated with CRISPR-Cas, modulate the activities of Cas endonucleases, and create "genome safeguard" systems where further editing is restricted. The study and utilization of Acrs hold promise for advancing the precision and control of CRISPR-Cas technologies.Graphical abstractEnhancing CRISPR with Anti-CRISPR Protein
引用
收藏
页码:47 / 59
页数:13
相关论文
共 50 条
  • [1] Anti-CRISPR proteins: a weapon of phage-bacterial arm race for genome editing
    Sandeep Jaiswal
    Lal Bahadur Singh
    Kuldeep Kumar
    Joshitha Vijayan
    Nivedita Shettigar
    Sudhir Kumar Jha
    Khela Ram Soren
    [J]. The Nucleus, 2024, 67 : 47 - 59
  • [2] Applications of Anti-CRISPR Proteins in Genome Editing and Biotechnology
    Kraus, Carolyn
    Sontheimer, Erik J.
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2023, 435 (13)
  • [3] Expanding the application of anti-CRISPR proteins in plants for tunable genome editing
    Liu, Yang
    Yuan, Guoliang
    Hyden, Brennan
    Tuskan, Gerald A.
    Abraham, Paul E.
    Yang, Xiaohan
    [J]. PLANT PHYSIOLOGY, 2023, 192 (01) : 60 - 64
  • [4] Structural Insights into Crispr and Anti-Crispr Systems for Precise Genome Editing
    Jiang, Fuguo
    Liu, Junjie
    Nogales, Eva
    Bondy-Denomy, Joseph
    Doudna, Jennifer
    [J]. PROTEIN SCIENCE, 2018, 27 : 55 - 56
  • [5] A comprehensive appraisal of mechanism of anti-CRISPR proteins: an advanced genome editor to amend the CRISPR gene editing
    Choudhary, Nisha
    Tandi, Dipty
    Verma, Rakesh Kumar
    Yadav, Virendra Kumar
    Dhingra, Naveen
    Ghosh, Tathagata
    Choudhary, Mahima
    Gaur, Rajarshi K. K.
    Abdellatif, Magda H. H.
    Gacem, Amel
    Eltayeb, Lienda Bashier
    Alqahtani, Mohammed S. S.
    Yadav, Krishna Kumar
    Jeon, Byong-Hun
    [J]. FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [6] Usage of Anti-CRISPR as a limiter in controlled genome editing processes
    Ostapchuk, Nikita
    [J]. FASEB JOURNAL, 2021, 35
  • [7] Tissue-restricted genome editing in vivo specified by microRNA-repressible anti-CRISPR proteins
    Lee, Jooyoung
    Mou, Haiwei
    Ibraheim, Raed
    Liang, Shun-Qing
    Liu, Pengpeng
    Xue, Wen
    Sontheimer, Erik J.
    [J]. RNA, 2019, 25 (11) : 1421 - 1431
  • [8] Anti-CRISPR Proteins in Archaea
    Peng, Xu
    Mayo-Munoz, David
    Bhoobalan-Chitty, Yuvaraj
    Martinez-Alvarez, Laura
    [J]. TRENDS IN MICROBIOLOGY, 2020, 28 (11) : 913 - 921
  • [9] Anti-CRISPR proteins: Counterattack of phages on bacterial defense (CRISPR/Cas) system
    Chaudhary, Kulbhushan
    Chattopadhyay, Anirudha
    Pratap, Dharmendra
    [J]. JOURNAL OF CELLULAR PHYSIOLOGY, 2018, 233 (01) : 57 - 59