From WSI-level to patch-level: Structure prior-guided binuclear cell fine-grained detection

被引:3
|
作者
Hu, Geng [1 ,2 ,3 ]
Wang, Baomin [1 ,2 ,3 ]
Hu, Boxian [1 ,2 ,3 ]
Chen, Dan [1 ,2 ,3 ]
Hu, Lihua [4 ]
Li, Cheng [5 ,6 ]
An, Yu [5 ,6 ]
Hu, Guiping [5 ,6 ]
Jia, Guang [7 ]
机构
[1] Beihang Univ, Sch Engn Med, Beijing 100191, Peoples R China
[2] Beihang Univ, Sch Biol Sci, Beijing 100191, Peoples R China
[3] Beihang Univ, Key Lab Biomech & Mechanobiol, Minist Educ, Beijing 100191, Peoples R China
[4] Peking Univ First Hosp, Dept Cardiol, Beijing, Peoples R China
[5] Beihang Univ, Sch Engn Med, Beijing 100191, Peoples R China
[6] Beihang Univ, Key Lab Big Data Based Precis Med, Minist Ind & Informat Technol, Beijing 100191, Peoples R China
[7] Peking Univ, Sch Publ Hlth, Dept Occupat & Environm Hlth Sci, Beijing 100191, Peoples R China
基金
中国国家自然科学基金;
关键词
Binuclear cells; Microscopy whole -slide images; Circular boundary boxes; Cytoplasm generator; Transformer; AUTOMATIC DETECTION; MICRONUCLEUS;
D O I
10.1016/j.media.2023.102931
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Accurate and quick binuclear cell (BC) detection plays a significant role in predicting the risk of leukemia and other malignant tumors. However, manual counting of BCs using microscope images is time consuming and subjective. Moreover, traditional image processing approaches perform poorly due to the limitations in staining quality and the diversity of morphological features in binuclear cell (BC) microscopy whole-slide images (WSIs). To overcome this challenge, we propose a multi-task method inspired by the structure prior of BCs based on deep learning, which cascades to implement BC coarse detection at the WSI level and fine-grained classification at the patch level. The coarse detection network is a multitask detection framework based on circular bounding boxes for cell detection and central key points for nucleus detection. Circle representation reduces the degrees of freedom, mitigates the effect of surrounding impurities compared to usual rectangular boxes and can be rotation invariant in WSIs. Detecting key points in the nucleus can assist in network perception and be used for unsupervised color layer segmentation in later fine-grained classification. The fine classification network consists of a background region suppression module based on color layer mask supervision and a key region selection module based on a transformer due to its global modeling capability. Additionally, an unsupervised and unpaired cytoplasm generator network is first proposed to expand the long-tailed distribution dataset. Finally, experiments are performed on BC multicenter datasets. The proposed BC fine detection method outperforms other benchmarks in almost all evaluation criteria, providing clarification and support for tasks such as cancer screenings.
引用
收藏
页数:13
相关论文
共 24 条
  • [21] Fine-Grained Question-Level Deception Detection via Graph-Based Learning and Cross-Modal Fusion
    Zhang, Huijun
    Ding, Yang
    Cao, Lei
    Wang, Xin
    Feng, Ling
    IEEE TRANSACTIONS ON INFORMATION FORENSICS AND SECURITY, 2022, 17 : 2452 - 2467
  • [22] Catch me if you can: A participant-level rumor detection framework via fine-grained user representation learning
    Chen, Xueqin
    Zhou, Fan
    Zhang, Fengli
    Bonsangue, Marcello
    Zhou, Fan (fan.zhou@uestc.edu.cn), 1600, Elsevier Ltd (58):
  • [23] Distillation of multi-class cervical lesion cell detection via synthesis-aided pre-training and patch-level feature alignment
    Fei, Manman
    Shen, Zhenrong
    Song, Zhiyun
    Wang, Xin
    Cao, Maosong
    Yao, Linlin
    Zhao, Xiangyu
    Wang, Qian
    Zhang, Lichi
    NEURAL NETWORKS, 2024, 178
  • [24] DualAttNet: Synergistic fusion of image-level and fine-grained disease attention for multi-label lesion detection in chest X-rays
    Xu, Qing
    Duan, Wenting
    COMPUTERS IN BIOLOGY AND MEDICINE, 2024, 168