Genome-wide analysis of TPX2 gene family in Populus trichocarpa and its specific response genes under various abiotic stresses

被引:1
|
作者
Qi, Meng [1 ]
Wang, Shengjie [1 ]
Li, Na [1 ]
Li, Lingfeng [1 ]
Zhang, Yue [1 ]
Xue, Jingyi [1 ]
Wang, Jingyi [1 ]
Wu, Rongling [1 ]
Lian, Na [1 ,2 ]
机构
[1] Beijing Forestry Univ, Coll Biol Sci & Technol, State Key Lab Tree Genet & Breeding, Beijing, Peoples R China
[2] Beijing Forestry Univ, Natl Engn Res Ctr Tree Breeding & Ecol Restorat, Beijing, Peoples R China
来源
基金
中国国家自然科学基金;
关键词
Populus; gene expression pattern; gene structure; phase separation; stress treatment; PtTPX2 gene family; MICROTUBULE-ASSOCIATED PROTEIN; PROTEASOME-DEPENDENT DEGRADATION; SALT TOLERANCE; ORGANIZATION; IDENTIFICATION; MECHANISMS; DYNAMICS; DROUGHT; WDL3;
D O I
10.3389/fpls.2023.1159181
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Microtubules are essential for regulating cell morphogenesis, plant growth, and the response of plants to abiotic stresses. TPX2 proteins are the main players determining the spatiotemporally dynamic nature of the MTs. However, how TPX2 members respond to abiotic stresses in poplar remains largely unknown. Herein, 19 TPX2 family members were identified from the poplar genome and analyzed the structural characteristics as well as gene expression patterns. All TPX2 members had the conserved structural characteristics, but exhibited different expression profiles in different tissues, indicating their varying roles during plant growth. Additionally, several light, hormone, and abiotic stress responsive cis-acting regulatory elements were detected on the promoters of PtTPX2 genes. Furthermore, expression analysis in various tissues of Populus trichocarpa showed that the PtTPX2 genes responded differently to heat, drought and salt stress. In summary, these results provide a comprehensive analysis for the TPX2 gene family in poplar and an effective contribution to revealing the mechanisms of PtTPX2 in the regulatory network of abiotic stress.
引用
下载
收藏
页数:12
相关论文
共 50 条
  • [41] Genome-Wide Identification and Characterization of the bHLH Gene Family and Its Response to Abiotic Stresses in Carthamus tinctorius
    Tan, Zhengwei
    Lu, Dandan
    Yu, Yongliang
    Li, Lei
    Dong, Wei
    Xu, Lanjie
    Yang, Qing
    Wan, Xiufu
    Liang, Huizhen
    PLANTS-BASEL, 2023, 12 (21):
  • [42] Genome-Wide Identification of SWEET Gene Family and Its Response to Abiotic Stresses in Valencia Sweet Orange
    Yao, Tingshan
    Xie, Rangjin
    Zhou, Yan
    Hu, Junhua
    Gao, Yue
    Zhou, Changyong
    PLANT MOLECULAR BIOLOGY REPORTER, 2021, 39 (03) : 546 - 556
  • [43] Genome-wide investigation of malate dehydrogenase gene family in poplar (Populus trichocarpa) and their expression analysis under salt stress
    Chen, Xinghao
    Zhang, Jun
    Zhang, Chao
    Wang, Shijie
    Yang, Minsheng
    ACTA PHYSIOLOGIAE PLANTARUM, 2021, 43 (02)
  • [44] Genome-wide investigation of malate dehydrogenase gene family in poplar (Populus trichocarpa) and their expression analysis under salt stress
    Xinghao Chen
    Jun Zhang
    Chao Zhang
    Shijie Wang
    Minsheng Yang
    Acta Physiologiae Plantarum, 2021, 43
  • [45] Genome-wide analysis of UGDH genes in Populus trichocarpa and responsiveness to nitrogen treatment
    Zhang, Shuang
    Cao, Lina
    Sun, Xue
    Yu, Jiajie
    Xu, Xiuyue
    Chang, Ruhui
    Suo, Juanfang
    Liu, Guanjun
    Xu, Zhiru
    Qu, Chunpu
    3 BIOTECH, 2021, 11 (03)
  • [46] Genome-Wide Analysis of BURP Domain-Containing Genes in Populus trichocarpa
    Shao, Yuanhua
    Wei, Guo
    Wang, Ling
    Dong, Qing
    Zhao, Yang
    Chen, Beijiu
    Xiang, Yan
    JOURNAL OF INTEGRATIVE PLANT BIOLOGY, 2011, 53 (09) : 743 - 755
  • [47] Genome-Wide Identification of Hsp90 Gene Family in Perennial Ryegrass and Expression Analysis under Various Abiotic Stresses
    Appiah, Charlotte
    Yang, Zhong-Fu
    He, Jie
    Wang, Yang
    Zhou, Jie
    Xu, Wen-Zhi
    Nie, Gang
    Zhu, Yong-Qun
    PLANTS-BASEL, 2021, 10 (11):
  • [48] Genome-wide analysis of UGDH genes in Populus trichocarpa and responsiveness to nitrogen treatment
    Shuang Zhang
    Lina Cao
    Xue Sun
    Jiajie Yu
    Xiuyue Xu
    Ruhui Chang
    Juanfang Suo
    Guanjun Liu
    Zhiru Xu
    Chunpu Qu
    3 Biotech, 2021, 11
  • [49] Genome-wide identification and characterization of the Populus WRKY transcription factor family and analysis of their expression in response to biotic and abiotic stresses
    Jiang, Yuanzhong
    Duan, Yanjiao
    Yin, Jia
    Ye, Shenglong
    Zhu, Jingru
    Zhang, Faqi
    Lu, Wanxiang
    Fan, Di
    Luo, Keming
    JOURNAL OF EXPERIMENTAL BOTANY, 2014, 65 (22) : 6629 - 6644
  • [50] The CBL and CIPK Gene Family in Grapevine (Vitis vinifera): Genome-Wide Analysis and Expression Profiles in Response to Various Abiotic Stresses
    Xi, Yue
    Liu, Jinyi
    Dong, Chao
    Cheng, Zong-Ming
    FRONTIERS IN PLANT SCIENCE, 2017, 8