Hybrid genome assemblies of four Shiga toxin-producing Escherichia coli strains containing a complete locus of enterocyte effacement and an O-Island 122

被引:0
|
作者
McCarthy, Siobhan C. [1 ,2 ]
Macori, Guerrino [1 ,3 ]
Burgess, Catherine M. [2 ]
Duffy, Geraldine [2 ]
Fanning, Seamus [1 ]
机构
[1] Univ Coll Dublin, UCD Ctr Food Safety, Sch Hlth Physiotherapy & Sports Sci, Dublin, Ireland
[2] Teagasc Food Res Ctr, Food Safety Dept, Dublin, Ireland
[3] Univ Coll Dublin, Sch Biol & Environm Sci, Dublin, Ireland
关键词
shiga toxin-producing Escherichia coli; foodborne disease; pathogenicity islands; next generation sequencing;
D O I
10.1128/MRA.00046-23
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This study describes the hybrid genome assemblies of four Shiga toxin-producing Escherichia coli strains isolated from the recto-anal junction of slaughter-age Irish sheep. In silico serotyping and genome analysis determined that each of the strains harbored a Shiga-toxin subtype, a complete locus of enterocyte effacement, and a rare O-island 122.
引用
收藏
页数:4
相关论文
共 50 条
  • [31] Draft Genome Sequences of Seven Strains of Shiga Toxin-Producing Escherichia coli O111 with Variation in Their Sensitivity to Novobiocin
    Rotundo, Luca
    Boccia, Federica
    Fratamico, Pina M.
    Xu, Aixia
    Sommers, Christopher H.
    Liu, Yanhong
    Bono, James L.
    Pepe, Tiziana
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2018, 7 (10):
  • [32] Molecular characteristics and epidemiological significance of Shiga toxin-producing Escherichia coli O26 strains
    Zhang, WL
    Bielaszewska, M
    Liesegang, A
    Tschäpe, H
    Schmidt, H
    Bitzan, M
    Karch, H
    JOURNAL OF CLINICAL MICROBIOLOGY, 2000, 38 (06) : 2134 - 2140
  • [33] Molecular characterisation of Shiga toxin-producing Escherichia coli O157 strains isolated in Poland
    Osek, J
    RESEARCH IN VETERINARY SCIENCE, 2001, 70 (02) : 175 - 177
  • [34] Locus of Adhesion and Autoaggregation (LAA), a pathogenicity island present in emerging Shiga Toxin–producing Escherichia coli strains
    David A. Montero
    Juliana Velasco
    Felipe Del Canto
    Jose L. Puente
    Nora L. Padola
    David A. Rasko
    Mauricio Farfán
    Juan C. Salazar
    Roberto Vidal
    Scientific Reports, 7
  • [35] Characterization of Shiga toxin-producing Escherichia coli O26 strains and establishment of selective isolation media for these strains
    Hiramatsu, R
    Matsumoto, M
    Miwa, Y
    Suzuki, Y
    Saito, M
    Miyazaki, Y
    JOURNAL OF CLINICAL MICROBIOLOGY, 2002, 40 (03) : 922 - 925
  • [36] Physiologic and Molecular Markers for Detection of Shiga Toxin-Producing Escherichia coli Serotype O26 Strains
    Murinda, Shelton E.
    Oliver, Stephen P.
    FOODBORNE PATHOGENS AND DISEASE, 2006, 3 (02) : 163 - 177
  • [37] Molecular and Phylogenetic Characterization of Non-O157 Shiga Toxin-Producing Escherichia coli Strains in China
    Bai, Xiangning
    Hu, Bin
    Xu, Yanmei
    Sun, Hui
    Zhao, Ailan
    Ba, Pengbin
    Fu, Shanshan
    Fan, Ruyue
    Jin, Yujuan
    Wang, Hong
    Guo, Qiusheng
    Xu, Xuebin
    Lu, Shan
    Xiong, Yanwen
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2016, 6
  • [38] Draft Genome Sequences of 12 Shiga Toxin-Producing Escherichia coli Strains Isolated from Dairy Cattle in Portugal
    Fiedler, Gregor
    Ballem, Andressa
    Brinks, Erik
    Almeida, Carina
    Franz, Charles M. A. P.
    Oliveira, Hugo
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2020, 9 (38):
  • [39] Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli O146:H10 Strains Recovered from a Foodborne Outbreak in China
    Huang, Hui
    Wang, Yanwen
    Wang, Chunxu
    Tang, Yong
    He, Lili
    Deng, Jieyu
    Pan, Xianmin
    MICROBIOLOGY RESOURCE ANNOUNCEMENTS, 2021, 10 (43):
  • [40] Whole-Genome Sequencing for National Surveillance of Shiga Toxin-Producing Escherichia coli O157
    Dallman, Timothy J.
    Byrne, Lisa
    Ashton, Philip M.
    Cowley, Lauren A.
    Perry, Neil T.
    Adak, Goutam
    Petrovska, Liljana
    Ellis, Richard J.
    Elson, Richard
    Underwood, Anthony
    Green, Jonathan
    Hanage, William P.
    Jenkins, Claire
    Grant, Kathie
    Wain, John
    CLINICAL INFECTIOUS DISEASES, 2015, 61 (03) : 305 - 312