A Unified Multi-Class Feature Selection Framework for Microarray Data

被引:0
|
作者
Ding, Xiaojian [1 ]
Yang, Fan [1 ]
Ma, Fumin [1 ]
Chen, Shilin [2 ]
机构
[1] Nanjing Univ Finance & Econ, Coll Informat Engn, Nanjing 210007, Peoples R China
[2] Nanjing Med Univ, Jiangsu Canc Hosp, Jiangsu Inst Canc Res, Thorac Surg,Canc Hosp, Nanjing 211166, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
Feature extraction; Training; Support vector machines; Task analysis; Optimization; Standards; Radial basis function networks; Multi-class feature selection; randomization; feature ranking criterion; microarray data; EXTREME LEARNING-MACHINE; GENE SELECTION; SVM-RFE; CANCER CLASSIFICATION; NEURAL-NETWORKS; REGRESSION;
D O I
10.1109/TCBB.2023.3314432
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In feature selection research, simultaneous multi-class feature selection technologies are popular because they simultaneously select informative features for all classes. Recursive feature elimination (RFE) methods are state-of-the-art binary feature selection algorithms. However, extending existing RFE algorithms to multi-class tasks may increase the computational cost and lead to performance degradation. With this motivation, we introduce a unified multi-class feature selection (UFS) framework for randomization-based neural networks to address these challenges. First, we propose a new multi-class feature ranking criterion using the output weights of neural networks. The heuristic underlying this criterion is that "the importance of a feature should be related to the magnitude of the output weights of a neural network". Subsequently, the UFS framework utilizes the original features to construct a training model based on a randomization-based neural network, ranks these features by the criterion of the norm of the output weights, and recursively removes a feature with the lowest ranking score. Extensive experiments on 15 real-world datasets suggest that our proposed framework outperforms state-of-the-art algorithms. The code of UFS is available at https://github.com/SVMrelated/UFS.git.
引用
下载
收藏
页码:3725 / 3736
页数:12
相关论文
共 50 条
  • [41] Local Feature Selection by Formal Concept Analysis for Multi-class Classification
    Ikeda, Madori
    Yamamoto, Akihiro
    TRENDS AND APPLICATIONS IN KNOWLEDGE DISCOVERY AND DATA MINING, 2014, 8643 : 470 - 482
  • [42] A joint learning framework for optimal feature extraction and multi-class SVM ☆
    Lai, Zhihui
    Liang, Guangfei
    Zhou, Jie
    Kong, Heng
    Lu, Yuwu
    INFORMATION SCIENCES, 2024, 671
  • [43] A minimax probabilistic approach to feature transformation for multi-class data
    Deng, Zhaohong
    Wang, Shitong
    Chung, Fu-lai
    APPLIED SOFT COMPUTING, 2013, 13 (01) : 116 - 127
  • [44] An adaptive feature fusion framework for multi-class classification based on SVM
    Yin, Peipei
    Sun, Fuchun
    Wang, Chao
    Liu, Huaping
    SOFT COMPUTING, 2008, 12 (07) : 685 - 691
  • [45] An adaptive feature fusion framework for multi-class classification based on SVM
    Peipei Yin
    Fuchun Sun
    Chao Wang
    Huaping Liu
    Soft Computing, 2008, 12 : 685 - 691
  • [46] Efficient Algorithms for Feature Selection in Multi-class Support Vector Machine
    Hoai An Le Thi
    Manh Cuong Nguyen
    ADVANCED COMPUTATIONAL METHODS FOR KNOWLEDGE ENGINEERING, 2013, 479 : 41 - 52
  • [47] Interpretable Classifiers in Precision Medicine: Feature Selection and Multi-class Categorization
    Schirra, Lyn-Rouven
    Schmid, Florian
    Kestler, Hans A.
    Lausser, Ludwig
    ARTIFICIAL NEURAL NETWORKS IN PATTERN RECOGNITION, 2016, 9896 : 105 - 116
  • [48] Feature selection for multi-class problems using support vector machines
    Li, GZ
    Yang, J
    Liu, GP
    Xue, L
    PRICAI 2004: TRENDS IN ARTIFICIAL INTELLIGENCE, PROCEEDINGS, 2004, 3157 : 292 - 300
  • [49] A GMM-Based Feature Selection Algorithm for Multi-Class Classification
    Choi, Tacksung
    Moon, Sunkuk
    Park, Young-cheol
    Youn, Dae-hee
    Lee, Seokpil
    IEICE TRANSACTIONS ON INFORMATION AND SYSTEMS, 2009, E92D (08): : 1584 - 1587
  • [50] Multi-Class Feature Selection Using Pairwise-class and All-class Techniques
    Chen, Bo
    Li, Guo-Zheng
    You, Mingyu
    2010 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE WORKSHOPS (BIBMW), 2010, : 644 - 647