Covalent fragment mapping of KRasG12C revealed novel chemotypes with in vivo potency

被引:2
|
作者
Orgovan, Zoltan [1 ,2 ]
Peczka, Nikolett [1 ,2 ,3 ]
Petri, Laszlo [1 ,2 ]
Abranyi-Balogh, Peter [1 ,2 ,3 ]
Randelovic, Ivan [4 ]
Toth, Szilard [5 ]
Szakacs, Gergely [5 ]
Nyiri, Kinga [5 ,6 ]
Vertessy, Beata [5 ,6 ]
Palfy, Gyula [7 ,8 ]
Vida, Istvan [7 ,8 ]
Perczel, Andras [7 ,8 ]
Tovari, Jozsef [9 ,10 ]
Keseru, Gyorgy M. [1 ,2 ,3 ]
机构
[1] Res Ctr Nat Sci, Med Chem Res Grp, Budapest, Hungary
[2] Natl Drug Discovery & Dev Lab, Budapest, Hungary
[3] Budapest Univ Technol & Econ, Fac Chem Technol & Biotechnol, Dept Organ Chem & Technol, Budapest, Hungary
[4] KINETO Lab Ltd, Budapest, Hungary
[5] Res Ctr Nat Sci, Inst Enzymol, Budapest, Hungary
[6] Budapest Univ Technol & Econ, Dept Appl Biotechnol & Food Sci, Budapest, Hungary
[7] Eotvos Lorand Univ, Lab Struct Chem & Biol, Budapest, Hungary
[8] Eotvos Lorand Univ, MTA ELTE Prot Modelling Res Grp, Budapest, Hungary
[9] Natl Inst Oncol, Dept Expt Pharmacol, Budapest, Hungary
[10] Natl Inst Oncol, Natl Tumor Biol Lab, Budapest, Hungary
关键词
K-RAS; DISCOVERY; INHIBITORS; LIGAND;
D O I
10.1016/j.ejmech.2023.115212
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
G12C mutant KRas is considered druggable by allele-specific covalent inhibitors due to the nucleophilic character of the oncogenic mutant cysteine at position 12. Discovery of these inhibitors requires the optimization of both covalent and noncovalent interactions. Here, we report covalent fragment screening of our elec-trophilic fragment library of diverse non-covalent scaffolds equipped with 40 different electrophilic functionalities to identify fragments as suitable starting points targeting Cys12. Screening the library against KRasG12C using Ellman's free thiol assay, followed by protein NMR and cell viability assays, resulted in two potential inhibitor chemotypes. Characterization of these scaffolds in in vitro cellular-and in vivo xenograft models revealed them as promising starting points for covalent drug discovery programs.
引用
收藏
页数:7
相关论文
共 50 条
  • [41] JDQ443, a Structurally Novel, Pyrazole-Based, Covalent Inhibitor of KRASG12C for the Treatment of Solid Tumors
    Lorthiois, Edwige
    Gerspacher, Marc
    Beyer, Kim S.
    Vaupel, Andrea
    Leblanc, Catherine
    Stringer, Rowan
    Weiss, Andreas
    Wilcken, Rainer
    Guthy, Daniel A.
    Lingel, Andreas
    Bomio-Confaglia, Claudio
    Machauer, Rainer
    Rigollier, Pascal
    Ottl, Johannes
    Arz, Dorothee
    Bernet, Pascal
    Desjonqueres, Gaelle
    Dussauge, Solene
    Kazic-Legueux, Malika
    Lozac'h, Marie-Anne
    Mura, Christophe
    Sorge, Mickael
    Todorov, Milen
    Warin, Nicolas
    Zink, Florence
    Voshol, Hans
    Zecri, Frederic J.
    Sedrani, Richard C.
    Ostermann, Nils
    Brachmann, Saskia M.
    Cotesta, Simona
    JOURNAL OF MEDICINAL CHEMISTRY, 2022, 65 (24) : 16173 - 16203
  • [42] Sotorasib in KRASG12C mutated lung cancer
    Olivier, Timothee
    Prasad, Vinay
    LANCET, 2024, 403 (10422):
  • [43] Assessment of KRASG12C inhibitors for colorectal cancer
    Piazza, Gary A.
    Chandrasekaran, Preethi
    Maxuitenko, Yulia Y.
    Budhwani, Karim I.
    FRONTIERS IN ONCOLOGY, 2024, 14
  • [44] Design, Structure Optimization, and Preclinical Characterization of JAB-21822, a Covalent Inhibitor of KRASG12C
    Li, Amin
    Li, Sujing
    Wang, Peng
    Dang, Chaojie
    Fan, Xinrui
    Chen, Mengran
    Liu, Dan
    Li, Fu
    Liu, Huan
    Zhang, Wei
    Wang, Yanping
    Wang, Yinxiang
    JOURNAL OF MEDICINAL CHEMISTRY, 2025, 68 (03) : 2422 - 2436
  • [45] Acquired Resistance to KRASG12C Inhibition in Cancer
    Awad, M. M.
    Liu, S.
    Rybkin, I. I.
    Arbour, K. C.
    Dilly, J.
    Zhu, V. W.
    Johnson, M. L.
    Heist, R. S.
    Patil, T.
    Riely, G. J.
    Jacobson, J. O.
    Yang, X.
    Persky, N. S.
    Root, D. E.
    Lowder, K. E.
    Feng, H.
    Zhang, S. S.
    Haigis, K. M.
    Hung, Y. P.
    Sholl, L. M.
    Wolpin, B. M.
    Wiese, J.
    Christiansen, J.
    Lee, J.
    Schrock, A. B.
    Lim, L. P.
    Garg, K.
    Li, M.
    Engstrom, L. D.
    Waters, L.
    Lawson, J. D.
    Olson, P.
    Lito, P.
    Ou, S. -H. I.
    Christensen, J. G.
    Janne, P. A.
    Aguirre, A. J.
    NEW ENGLAND JOURNAL OF MEDICINE, 2021, 384 (25): : 2382 - 2393
  • [46] Fit-for-Purpose Synthesis of a KRASG12C Covalent Inhibitor, via a Diastereoselective Hayashi Arylation
    Molinaro, Carmela
    Wong, Nicholas
    White, Nicholas A.
    Sirois, Lauren E.
    Bigler, Raphael
    Bindschaedler, Quentin P.
    Do, Steven
    Malhotra, Sushant
    Gosselin, Francis
    ORGANIC PROCESS RESEARCH & DEVELOPMENT, 2024, 28 (08) : 3313 - 3325
  • [47] Synthesis of Adagrasib (MRTX849), a Covalent KRASG12C Inhibitor Drug for the Treatment of Cancer
    Chen, Cheng-yi
    Lu, Zhichao
    Scattolin, Thomas
    Chen, Chengsheng
    Gan, Yonghong
    McLaughlin, Mark
    ORGANIC LETTERS, 2023, : 944 - 949
  • [48] Efficient targeted oncogenic KRASG12C degradation via first reversible-covalent PROTAC
    Yang, Fang
    Wen, Yalei
    Wang, Chaofan
    Zhou, Yuee
    Zhou, Yang
    Zhang, Zhi-Min
    Liu, Tongzheng
    Lu, Xiaoyun
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2022, 230
  • [49] In vitro and in vivo characterization of BI 1823911-a novel KRASG12C selective small molecule inhibitor.
    Savarese, Fabio
    Gollner, Andreas
    Rudolph, Dorothea
    Lipp, Jesse
    Popow, Johannes
    Hofmann, Marco H.
    Arnhof, Heribert
    Rinnenthal, Joerg
    Trapani, Francesca
    Gmachl, Michael
    Gerlach, Daniel
    Broeker, Joachim
    Ettmayer, Peter
    Mantoulidis, Andreas
    Phan, Jason
    Smethurst, Christian A.
    Treu, Matthias
    Waterson, Alex G.
    Lu, Hengyu
    Machado, Annette
    Daniele, Joseph
    Fesik, Stephan W.
    Vellano, Christopher P.
    Heffernan, Timothy P.
    Marszalek, Joseph R.
    McConnell, Darryl B.
    Petronczki, Mark
    Kraut, Norbert
    Waizenegger, Irene C.
    CANCER RESEARCH, 2021, 81 (13)
  • [50] Design, synthesis and bioactivity evaluation of novel quinazoline based KRASG12C inhibitors
    Liu, Qingxu
    Li, Yan
    Zhi, Ying
    Liu, Bo
    Sun, Jingyong
    NEW JOURNAL OF CHEMISTRY, 2022, 46 (10) : 4827 - 4836