Genome-Wide Identification, Characterization, and Expression of TCP Genes Family in Orchardgrass

被引:3
|
作者
Wang, Cheng [1 ]
Feng, Guangyan [1 ]
Xu, Xiaoheng [1 ]
Huang, Linkai [1 ]
Nie, Gang [1 ]
Li, Dandan [1 ]
Zhang, Xinquan [1 ]
机构
[1] Sichuan Agr Univ, Coll Grassland Sci & Technol, Chengdu 611130, Peoples R China
基金
中国国家自然科学基金;
关键词
Dactylis glomerata; TCP gene family; floral development; tillering; expression analysis; TRANSCRIPTION FACTORS; ARABIDOPSIS-THALIANA; EVOLUTION; GROWTH; SALT; ELONGATION; ASYMMETRY; BRANCHED1; PROTEINS; ELEMENTS;
D O I
10.3390/genes14040925
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Plant-specific TCP transcription factors regulate several plant growth and development processes. Nevertheless, little information is available about the TCP family in orchardgrass (Dactylis glomerata L.). This study identified 22 DgTCP transcription factors in orchardgrass and determined their structure, phylogeny, and expression in different tissues and developmental stages. The phylogenetic tree classified the DgTCP gene family into two main subfamilies, including class I and II supported by the exon-intron structure and conserved motifs. The DgTCP promoter regions contained various cis-elements associated with hormones, growth and development, and stress responses, including MBS (drought inducibility), circadian (circadian rhythms), and TCA-element (salicylic acid responsiveness). Moreover, DgTCP9 possibly regulates tillering and flowering time. Additionally, several stress treatments upregulated DgTCP1, DgTCP2, DgTCP6, DgTCP12, and DgTCP17, indicting their potential effects regarding regulating responses to the respective stress. This research offers a valuable basis for further studies of the TCP gene family in other Gramineae and reveals new ideas for increasing gene utilization.
引用
收藏
页数:18
相关论文
共 50 条
  • [41] Genome-wide identification and characterization of bHLH family genes from Ginkgo biloba
    Zhou, Xian
    Liao, Yongling
    Kim, Soo-Un
    Chen, Zexiong
    Nie, Gongping
    Cheng, Shuiyuan
    Ye, Jiabao
    Xu, Feng
    [J]. SCIENTIFIC REPORTS, 2020, 10 (01)
  • [42] Genome-wide identification, evolution of chromobox family genes and their expression in Nile tilapia
    Liu, Xing-Yong
    Zhang, Xian-Bo
    Li, Ming-Hui
    Zheng, Shu-Qing
    Liu, Zhi-Long
    Cheng, Yun-Ying
    Wang, De-Shou
    [J]. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, 2017, 203 : 25 - 34
  • [43] Genome-wide identification and characterization of bHLH family genes from Ginkgo biloba
    Xian Zhou
    Yongling Liao
    Soo-Un Kim
    Zexiong Chen
    Gongping Nie
    Shuiyuan Cheng
    Jiabao Ye
    Feng Xu
    [J]. Scientific Reports, 10
  • [44] Genome-wide identification and characterization of TCP transcription factor genes in upland cotton (Gossypium hirsutum)
    Wen Li
    Deng-Di Li
    Li-Hong Han
    Miao Tao
    Qian-Qian Hu
    Wen-Ying Wu
    Jing-Bo Zhang
    Xue-Bao Li
    Geng-Qing Huang
    [J]. Scientific Reports, 7
  • [45] Genome-wide identification and characterization of TCP transcription factor genes in upland cotton (Gossypium hirsutum)
    Li, Wen
    Li, Deng-Di
    Han, Li-Hong
    Tao, Miao
    Hu, Qian-Qian
    Wu, Wen-Ying
    Zhang, Jing-Bo
    Li, Xue-Bao
    Huang, Geng-Qing
    [J]. SCIENTIFIC REPORTS, 2017, 7
  • [46] Genome-wide identification and expression pattern analysis of the TCP transcription factor family in Ginkgo biloba
    Yu, Li
    Chen, Qiangwen
    Zheng, Jiarui
    Xu, Feng
    Ye, Jiabao
    Zhang, Weiwei
    Liao, Yongling
    Yang, Xiaoyan
    [J]. PLANT SIGNALING & BEHAVIOR, 2022, 17 (01)
  • [47] Genome-wide identification and characterization of TCP gene family in Dendrobium nobile and their role in perianth development
    Wei, Xinrui
    Yuan, Meng
    Zheng, Bao-Qiang
    Zhou, Lin
    Wang, Yan
    [J]. FRONTIERS IN PLANT SCIENCE, 2024, 15
  • [48] Genome-Wide Identification and Expression Profiling of the TCP Family Genes in Spike and Grain Development of Wheat (Triticum aestivum L.)
    Zhao, Junmin
    Zhai, Zhiwen
    Li, Yanan
    Geng, Shuaifeng
    Song, Gaoyuan
    Guan, Jiantao
    Jia, Meiling
    Wang, Fang
    Sun, Guoliang
    Feng, Nan
    Kong, Xingchen
    Chen, Liang
    Mao, Long
    Li, Aili
    [J]. FRONTIERS IN PLANT SCIENCE, 2018, 9
  • [49] Genome-wide identification, characterization and expression profiling of gibberellin metabolism genes in jute
    Honi, Ummay
    Amin, Md. Ruhul
    Kabir, Shah Md Tamim
    Bashar, Kazi Khayrul
    Moniruzzaman, Md.
    Jahan, Rownak
    Jahan, Sharmin
    Haque, Md. Samiul
    Islam, Shahidul
    [J]. BMC PLANT BIOLOGY, 2020, 20 (01)
  • [50] Genome-wide identification, characterization and expression profiling of gibberellin metabolism genes in jute
    Ummay Honi
    Md. Ruhul Amin
    Shah Md Tamim Kabir
    Kazi Khayrul Bashar
    Md. Moniruzzaman
    Rownak Jahan
    Sharmin Jahan
    Md. Samiul Haque
    Shahidul Islam
    [J]. BMC Plant Biology, 20