Genomic analyses of renal cell carcinoma employing next generation sequencing

被引:0
|
作者
Gruellich, Carsten [1 ,2 ]
机构
[1] Hochwald Kliniken Weiskirchen, Klin Onkol & Hamatol, Weiskirchen, Germany
[2] Hochwald Kliniken Weiskirchen, Klin Onkol & Hamatol, Kurzentrum 1, D-66709 Weiskirchen, Germany
来源
ONKOLOGIE | 2023年
关键词
Genetic variation; Molecular targeted therapies; Allele frequency; Genetic heterogeneity; ALK kinase; HETEROGENEITY;
D O I
10.1007/s00761-023-01344-7
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: The availability of next generation sequencing (NGS) at economical costs and timely processing has opened up new possibilities to understand the molecular mechanisms of tumor development and treatment.Aims: The development of personalized oncology is based upon these new techniques. Molecular targeted therapies have become standard in many hematologic malignancies, in lung cancer, colorectal cancer, and many more tumor diseases. For renal cell carcinoma (RCC), an ever-growing body of genomic data obtained by NGS exist.Materials and methods: We present a comprehensive literature review and publications from our own patient collective.Results: Several studies in RCC have shown a remarkable heterogeneity not only within the primary tumor but also among different metastases of the same tumor. Heterogeneity further increases under therapy as an expression of molecular evolution. The majority of molecular changes discovered thus far encompass genes that function as tumor suppressors. An exception seems to be rearrangements in the ALK gene.Conclusion: The molecular heterogeneity and the absence of oncogenic driver genes with the exception of ALK rearrangements complicates the development of personalized targeted therapies based on the molecular changes found to date.
引用
收藏
页码:632 / 635
页数:4
相关论文
共 50 条
  • [41] Prospective genomic characterization of small cell lung cancer by targeted next generation sequencing
    Won, Helen H.
    Pietanza, M. Catherine
    Krug, Lee M.
    Varghese, Anna M.
    Rekhtman, Natasha
    Wang, Lu
    Travis, William
    Paik, Paul K.
    Riely, Gregory J.
    Zakowski, Maureen F.
    Ladanyi, Marc
    Kris, Mark G.
    Rudin, Charles M.
    Berger, Michael F.
    CANCER RESEARCH, 2015, 75
  • [42] Next generation sequencing and comparative analyses of Xenopus mitogenomes
    Rhiannon E Lloyd
    Peter G Foster
    Matthew Guille
    D Timothy J Littlewood
    BMC Genomics, 13
  • [43] GENERATION OF GENOMIC RESOURCES FOR ATLANTIC STURGEON USING NEXT GENERATION SEQUENCING
    Hori, T.
    Stannard, J.
    Plouffe, D.
    Buchanan, J.
    Fast, M.
    AQUACULTURE, 2017, 472 : 149 - 149
  • [44] Identification of gene mutations in ovarian clear cell carcinoma by next generation sequencing
    Tanaka, N.
    Maru, Y.
    Suzuka, K.
    Ijiri, M.
    Hippo, Y.
    Nagase, H.
    INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER, 2016, 26 : 840 - 840
  • [45] Next Generation Sequencing of Renal Medullary Carcinoma Diagnosed Concurrently with Sickle Cell Trait: A Case Report and Literature Review
    McCool, I.
    Dasgupta, A.
    Jordan, M.
    AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2020, 154 : S75 - S75
  • [46] COMPLETE GENOMIC SEQUENCING OF NOVEL HLA ALLELES USING NEXT GENERATION SEQUENCING
    Albrecht, Viviane
    Lang, Kathrin
    Heder, Carolin
    Schoene, Bianca
    Lange, Vinzenz
    Boehme, Irina
    Schmidt, Alexander H.
    TISSUE ANTIGENS, 2014, 84 (01): : 108 - 108
  • [47] Development and confirmation of potential gene classifiers of human clear cell renal cell carcinoma using next-generation RNA sequencing
    Eikrem, Oystein S.
    Strauss, Philipp
    Beisland, Christian
    Scherer, Andreas
    Landolt, Lea
    Flatberg, Arnar
    Leh, Sabine
    Beisvag, Vidar
    Skogstrand, Trude
    Hjelle, Karin
    Shresta, Anjana
    Marti, Hans-Peter
    SCANDINAVIAN JOURNAL OF UROLOGY, 2016, 50 (06) : 452 - 462
  • [48] Genomic Profiling of Micropapillary Adenocarcinoma of the Lung by Next Generation Sequencing
    Sande, Christopher
    Guseva, Natalya
    Stence, Aaron
    Zhang, Jun
    Ma, Deqin
    LABORATORY INVESTIGATION, 2018, 98 : 749 - 750
  • [49] Genomic Next Generation Sequencing and quality assurance: challenges and opportunities
    Eggermann, Thomas
    MOLECULAR CYTOGENETICS, 2019, 12
  • [50] Unraveling genomic variation from next generation sequencing data
    Pavlopoulos, Georgios A.
    Oulas, Anastasis
    Iacucci, Ernesto
    Sifrim, Alejandro
    Moreau, Yves
    Schneider, Reinhard
    Aerts, Jan
    Iliopoulos, Ioannis
    BIODATA MINING, 2013, 6