Phenotype Analysis of Arabidopsis thaliana Based on Optimized Multi-Task Learning

被引:0
|
作者
Yuan, Peisen [1 ]
Xu, Shuning [1 ]
Zhai, Zhaoyu [1 ]
Xu, Huanliang [1 ]
机构
[1] Nanjing Agr Univ, Coll Artificial Intelligence, Nanjing 210095, Peoples R China
关键词
plant phenotype; multi-task learning; VGG16; hard parameter sharing; Arabidopsis thaliana;
D O I
10.3390/math11183821
中图分类号
O1 [数学];
学科分类号
0701 ; 070101 ;
摘要
Deep learning techniques play an important role in plant phenotype research, due to their powerful data processing and modeling capabilities. Multi-task learning has been researched for plant phenotype analysis, which can combine different plant traits and allow for a consideration of correlations between multiple phenotypic features for more comprehensive analysis. In this paper, an intelligent and optimized multi-task learning method for the phenotypic analysis of Arabidopsis thaliana is proposed and studied. Based on the VGG16 network, hard parameter sharing and task-dependent uncertainty are used to weight the loss function of each task, allowing parameters associated with genotype classification, leaf number counting, and leaf area prediction tasks to be learned jointly. The experiments were conducted on the Arabidopsis thaliana dataset, and the proposed model achieved weighted classification accuracy, precision, and F-omega scores of 96.88%, 97.50%, and 96.74%, respectively. Furthermore, the coefficient of determination R-2 values in the leaf number and leaf area regression tasks reached 0.7944 and 0.9787, respectively.
引用
收藏
页数:18
相关论文
共 50 条
  • [1] Research of intelligent reasoning system of Arabidopsis thaliana phenotype based on automated multi-task machine learning
    Yuan, Peisen
    Xu, Shuning
    Zhai, Zhaoyu
    Xu, Huanliang
    FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [2] Comic MTL: optimized multi-task learning for comic book image analysis
    Nhu-Van Nguyen
    Rigaud, Christophe
    Burie, Jean-Christophe
    INTERNATIONAL JOURNAL ON DOCUMENT ANALYSIS AND RECOGNITION, 2019, 22 (03) : 265 - 284
  • [3] Comic MTL: optimized multi-task learning for comic book image analysis
    Nhu-Van Nguyen
    Christophe Rigaud
    Jean-Christophe Burie
    International Journal on Document Analysis and Recognition (IJDAR), 2019, 22 : 265 - 284
  • [4] Multi-task gradient descent for multi-task learning
    Lu Bai
    Yew-Soon Ong
    Tiantian He
    Abhishek Gupta
    Memetic Computing, 2020, 12 : 355 - 369
  • [5] Multi-task gradient descent for multi-task learning
    Bai, Lu
    Ong, Yew-Soon
    He, Tiantian
    Gupta, Abhishek
    MEMETIC COMPUTING, 2020, 12 (04) : 355 - 369
  • [6] A Multi-Task Learning Formulation for Survival Analysis
    Li, Yan
    Wang, Jie
    Ye, Jieping
    Reddy, Chandan K.
    KDD'16: PROCEEDINGS OF THE 22ND ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 2016, : 1715 - 1724
  • [7] Multi-task Learning for Mongolian Morphological Analysis
    Liu, Na
    Qing-Dao-Er-Ji, Ren
    Su, Xiangdong
    Ji, Yatu
    Aodengbala
    Liu, Guiping
    ARTIFICIAL NEURAL NETWORKS AND MACHINE LEARNING, ICANN 2023, PT IX, 2023, 14262 : 65 - 77
  • [8] Fabric Retrieval Based on Multi-Task Learning
    Xiang, Jun
    Zhang, Ning
    Pan, Ruru
    Gao, Weidong
    IEEE TRANSACTIONS ON IMAGE PROCESSING, 2021, 30 : 1570 - 1582
  • [9] Multi-task Learning Based Skin Segmentation
    Tan, Taizhe
    Shan, Zhenghao
    KNOWLEDGE SCIENCE, ENGINEERING AND MANAGEMENT, PT III, KSEM 2023, 2023, 14119 : 360 - 369
  • [10] Multi-Task Learning Based Network Embedding
    Wang, Shanfeng
    Wang, Qixiang
    Gong, Maoguo
    FRONTIERS IN NEUROSCIENCE, 2020, 13