Rational engineering of nucleic acid probe system for enhanced intracellular MicroRNA detection

被引:13
|
作者
Yang, Fan [1 ,2 ]
Lu, Huiting [4 ]
Meng, Xiangdan [4 ]
Li, Liping [2 ]
Dai, Wenhao [4 ]
Yang, Lingzhi [1 ]
Zhang, Ruiping [3 ]
Dong, Haifeng [1 ]
Zhang, Xueji [1 ]
机构
[1] Shenzhen Univ, Med Sch, Sch Biomed Engn, Marshall Lab Biomed Engn, Shenzhen 518060, Guangdong, Peoples R China
[2] Shanxi Med Univ, Coll Basic Med Sci, Taiyuan 030001, Peoples R China
[3] Shanxi Med Univ, Hosp 1, Radiol Dept, Taiyuan 030001, Peoples R China
[4] Univ Sci & Technol Beijing, Res Ctr Bioengn & Sensing Technol, Sch Chem & Biol Engn, Beijing Key Lab Bioengn & Sensing Technol, 30 Xueyuan Rd, Beijing 100083, Peoples R China
基金
中国国家自然科学基金;
关键词
Nucleic acid probe; microRNA imaging; Strand displacement reaction; Signal amplification; Specific response; Accurate detection; LIVING CELLS; DNA NANOMACHINE; IN-SITU; MOLECULAR BEACONS; HYBRIDIZATION; AMPLIFICATION; WALKER; MIRNA; QUANTIFICATION; DISCRIMINATION;
D O I
10.1016/j.ccr.2023.215157
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
The spatial-temporal and dynamic expression profiles of intracellular microRNA (miRNA) are extremely crucial for deciphering a serial of cellular biological behaviors and monitoring pathological processes. Intensive efforts have been devoted to design nucleic acid probe systems to carry out various biological tasks in living cells, which benefits from intrinsic biosecurity, excellent biocompatibility, ease of synthesis, and amenability to functional-ization. More important, given their highly efficient recognition and signal amplification ability to nucleic acid molecules via Watson-Crick base pairing-driven hybridization, they also become the best candidate tools for intracellular miRNA sensing. In this review, we highlight the recent achievements in nucleic acid probe systems, aiming to reveal how to customize intracellular miRNA analysis system with expected performance for enhanced detection, including the approaches for high sensitivity, good selectivity, and improved accuracy. The review ends with a "Conclusions and Perspectives" section highlighting the current challenges and future opportunities for nucleic acid probe systems regarding intracellular miRNA analysis.
引用
收藏
页数:16
相关论文
共 50 条
  • [41] Carbon dots and their interactions with recognition molecules for enhanced nucleic acid detection
    Garg, Rishabh
    Prasad, Dinesh
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2023, 680 : 93 - 107
  • [42] Nanowires array modified electrode for enhanced electrochemical detection of nucleic acid
    Ramulu, T. S.
    Venu, R.
    Sinha, B.
    Lim, B.
    Jeon, S. J.
    Yoon, S. S.
    Kim, C. G.
    BIOSENSORS & BIOELECTRONICS, 2013, 40 (01): : 258 - 264
  • [43] MNAzyme-catalyzed nucleic acid detection enhanced by a cationic copolymer
    Gao, Jueyuan
    Shimada, Naohiko
    Maruyama, Atsushi
    BIOMATERIALS SCIENCE, 2015, 3 (05) : 716 - 720
  • [44] Micropillar enhanced FRET-CRISPR biosensor for nucleic acid detection
    Bao, Mengdi
    Dollery, Stephen J.
    Yuqing, Fnu
    Tobin, Gregory J.
    Du, Ke
    LAB ON A CHIP, 2023, 24 (01) : 47 - 55
  • [45] Enhanced nucleic acid capture and flow cytometry detection with peptide nucleic acid probes and tunable-surface microparticles
    Chandler, DP
    Jarrell, AE
    ANALYTICAL BIOCHEMISTRY, 2003, 312 (02) : 182 - 190
  • [46] Progress on the Recognition, Complex Structure and Intracellular Detection of Nucleic Acid G-quadruplex
    Liu, Wenting
    Liu, Liuyi
    Zhu, Bochen
    Mao, Zongwan
    CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE, 2023, 44 (03):
  • [47] Hairpin cascade circuits on programmable DNA-nucleated spherical nucleic acid for intracellular targeted microRNA imaging
    Duan, Lu-Ying
    Hong, Yan-Ping
    Yang, Wu-Ying
    Zhang, Lin -Lin
    Liu, Jin-Wen
    CHEMICAL ENGINEERING JOURNAL, 2023, 473
  • [48] Engineering a Rigid Nucleic Acid Structure to Improve the Limit of Detection for Genetic Assays
    Malekjahani, Ayden
    Lekuti, Ayokunle A.
    Valiente, Pedro A.
    Osborne, Matthew
    Li, Vanessa Y. C.
    Kim, Philip M.
    Chan, Warren C. W.
    ANALYTICAL CHEMISTRY, 2024, 96 (23) : 9729 - 9736
  • [49] A molecular beacon-like Ag nanocluster fluorescence probe for nucleic acid detection
    Zhao, Ying
    Zhang, Hao
    Lian, Lili
    Wang, Xiyue
    Gao, Wenxiu
    Zhu, Bo
    Lou, Dawei
    ANALYTICAL SCIENCES, 2022, 38 (01) : 131 - 136
  • [50] Fluorescent Probe-Based Lateral Flow Assay for Multiplex Nucleic Acid Detection
    Xu, Ye
    Liu, Yinghua
    Wu, Yan
    Xia, Xiaohu
    Liao, Yiqun
    Li, Qingge
    ANALYTICAL CHEMISTRY, 2014, 86 (12) : 5611 - 5614