Time-resolved cryo-EM of G-protein activation by a GPCR

被引:28
|
作者
Papasergi-Scott, Makaia M. [1 ]
Perez-Hernandez, Guillermo [2 ,3 ,4 ]
Batebi, Hossein [5 ]
Gao, Yang [1 ]
Eskici, Goezde [1 ]
Seven, Alpay B. [1 ]
Panova, Ouliana [1 ]
Hilger, Daniel [1 ,6 ]
Casiraghi, Marina [1 ,7 ]
He, Feng [1 ]
Maul, Luis [8 ]
Gmeiner, Peter [8 ]
Kobilka, Brian K. [1 ]
Hildebrand, Peter W. [2 ,3 ,4 ,5 ,9 ]
Skiniotis, Georgios [1 ,10 ]
机构
[1] Stanford Univ, Sch Med, Dept Mol & Cellular Physiol, Stanford, CA 94305 USA
[2] Charite Univ Med Berlin, Berlin, Germany
[3] Free Univ Berlin, Berlin, Germany
[4] Humboldt Univ, Inst Med Phys & Biophys, Berlin, Germany
[5] Univ Leipzig, Inst Med Phys & Biophys, Fac Med, Leipzig, Germany
[6] Philipps Univ Marburg, Inst Pharmaceut Chem, Marburg, Germany
[7] Univ Milan, Dipartimento Biosci, Milan, Italy
[8] Friedrich Alexander Univ Erlangen Nurnberg, Dept Chem & Pharm, Med Chem, Erlangen, Germany
[9] Charite Univ Med Berlin, Berlin Inst Hlth, Berlin, Germany
[10] Stanford Univ, Sch Med, Dept Struct Biol, Stanford, CA 94305 USA
基金
美国国家卫生研究院;
关键词
BETA(2) ADRENERGIC-RECEPTOR; CRYSTAL-STRUCTURE; ADENYLATE-CYCLASE; DYNAMIC PROCESS; FORCE-FIELD; ALPHA; BINDING; COMPLEX; CONFORMATIONS; INTERFACE;
D O I
10.1038/s41586-024-07153-1
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
G-protein-coupled receptors (GPCRs) activate heterotrimeric G proteins by stimulating guanine nucleotide exchange in the G alpha subunit1. To visualize this mechanism, we developed a time-resolved cryo-EM approach that examines the progression of ensembles of pre-steady-state intermediates of a GPCR-G-protein complex. By monitoring the transitions of the stimulatory Gs protein in complex with the beta 2-adrenergic receptor at short sequential time points after GTP addition, we identified the conformational trajectory underlying G-protein activation and functional dissociation from the receptor. Twenty structures generated from sequential overlapping particle subsets along this trajectory, compared to control structures, provide a high-resolution description of the order of main events driving G-protein activation in response to GTP binding. Structural changes propagate from the nucleotide-binding pocket and extend through the GTPase domain, enacting alterations to G alpha switch regions and the alpha 5 helix that weaken the G-protein-receptor interface. Molecular dynamics simulations with late structures in the cryo-EM trajectory support that enhanced ordering of GTP on closure of the alpha-helical domain against the nucleotide-bound Ras-homology domain correlates with alpha 5 helix destabilization and eventual dissociation of the G protein from the GPCR. These findings also highlight the potential of time-resolved cryo-EM as a tool for mechanistic dissection of GPCR signalling events. Time-resolved cryo-EM is used to capture structural transitions during G-protein activation stimulated by a G-protein-coupled receptor.
引用
收藏
页码:1182 / 1191
页数:28
相关论文
共 50 条
  • [31] USP14-regulated allostery of the human proteasome by time-resolved cryo-EM
    Shuwen Zhang
    Shitao Zou
    Deyao Yin
    Lihong Zhao
    Daniel Finley
    Zhaolong Wu
    Youdong Mao
    Nature, 2022, 605 : 567 - 574
  • [32] USP14-regulated allostery of the human proteasome by time-resolved cryo-EM
    Zhang, Shuwen
    Zou, Shitao
    Yin, Deyao
    Zhao, Lihong
    Finley, Daniel
    Wu, Zhaolong
    Mao, Youdong
    NATURE, 2022, 605 (7910) : 567 - +
  • [33] Late steps in bacterial translation initiation visualized using time-resolved cryo-EM
    Sandip Kaledhonkar
    Ziao Fu
    Kelvin Caban
    Wen Li
    Bo Chen
    Ming Sun
    Ruben L. Gonzalez
    Joachim Frank
    Nature, 2019, 570 : 400 - 404
  • [34] Cryo-EM advances in GPCR structure determination
    Shihoya, Wataru
    Iwama, Aika
    Sano, Fumiya K.
    Nureki, Osamu
    JOURNAL OF BIOCHEMISTRY, 2024, 176 (01): : 1 - 10
  • [35] Signaling at the endosome: cryo-EM structure of a GPCR-G protein-beta-arrestin megacomplex
    Nguyen, Anthony H.
    Lefkowitz, Robert J.
    FEBS JOURNAL, 2021, 288 (08) : 2562 - 2569
  • [36] Phase-plate cryo-EM structure of a class B GPCR-G-protein complex
    Liang, Yi-Lynn
    Khoshouei, Maryam
    Radjainia, Mazdak
    Zhang, Yan
    Glukhova, Alisa
    Tarrasch, Jeffrey
    Thal, David M.
    Furness, Sebastian G. B.
    Christopoulos, George
    Coudrat, Thomas
    Danev, Radostin
    Baumeister, Wolfgang
    Miller, Laurence J.
    Christopoulos, Arthur
    Kobilka, Brian K.
    Wootten, Denise
    Skiniotis, Georgios
    Sexton, Patrick M.
    NATURE, 2017, 546 (7656) : 118 - +
  • [37] Cryo-EM for protein discovery
    Ullrich, Florian
    NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2021, 28 (12) : 958 - 958
  • [38] A PDMS-based Microfluidic Chip Assembly for Time-Resolved Cryo-EM (TRCEM) Sample Preparation
    Feng, Xiangsong
    Frank, Joachim
    BIO-PROTOCOL, 2025, 15 (04):
  • [39] Shaped Laser Pulses for Microsecond Time-Resolved Cryo-EM: Outrunning Crystallization during Flash Melting
    Kruger, Constantin R.
    Mowry, Nathan J.
    Drabbels, Marcel
    Lorenz, Ulrich J.
    JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2024, 15 (16): : 4244 - 4248
  • [40] Cryo-EM for protein discovery
    Florian Ullrich
    Nature Structural & Molecular Biology, 2021, 28 : 958 - 958