A pyridoxal 5'-phosphate-dependent Mannich cyclase

被引:20
|
作者
Gao, Jinmin [1 ]
Liu, Shaonan [1 ]
Zhou, Chen [1 ]
Lara, Darwin [1 ]
Zou, Yike [2 ]
Hai, Yang [1 ]
机构
[1] Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
[2] Lawrence Livermore Natl Lab, Phys & Life Sci Directorate, Livermore, CA 94550 USA
基金
美国国家卫生研究院;
关键词
C-BOND FORMATION; SUBSTRATE-SPECIFICITY; DEPENDENT ENZYME; LOLINE ALKALOIDS; AMINO-ACIDS; MECHANISM; DOCKING; LYASE;
D O I
10.1038/s41929-023-00963-y
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Pyridoxal 5'-phosphate (PLP)-dependent enzymes catalyse a diverse range of chemical transformations. Despite their extraordinary functional diversity, no PLP-dependent enzyme is known to catalyse Mannich-type reactions, an important carbon-carbon bond-forming reaction in synthetic organic chemistry. Here we report the discovery of a biosynthetic enzyme LolT, a PLP-dependent enzyme catalysing a stereoselective intramolecular Mannich reaction to construct the pyrrolizidine core scaffold in loline alkaloids. Importantly, its versatile catalytic activity is harnessed for stereoselective synthesis of a variety of conformationally constrained alpha,alpha-disubstituted alpha-amino acids, which bear vicinal quaternary-tertiary stereocentres and various aza(bi)cyclic backbones, such as indolizidine, quinolizidine, pyrrolidine and piperidine. Furthermore, crystallographic and mutagenesis analysis and computational studies together provided mechanistic insights and structural basis for understanding LolT's catalytic activity and stereoselectivity. Overall, this work expands the biocatalytic repertoire of carbon-carbon bond-forming enzymes and increases our knowledge of the catalytic versatility of PLP-dependent enzymes.
引用
收藏
页码:476 / +
页数:18
相关论文
共 50 条
  • [31] Pyridoxal phosphate-dependent reactions in natural products biosynthesis
    Ryan, Katherine
    FASEB JOURNAL, 2022, 36
  • [32] Biotin synthase is a pyridoxal phosphate-dependent cysteine desulfurase
    Ollagnier-de-Choudens, S
    Mulliez, E
    Hewitson, KS
    Fontecave, M
    BIOCHEMISTRY, 2002, 41 (29) : 9145 - 9152
  • [33] Pyridoxal phosphate-dependent reactions in the biosynthesis of natural products
    Du, Yi-Ling
    Ryan, Katherine S.
    NATURAL PRODUCT REPORTS, 2019, 36 (03) : 430 - 457
  • [34] Domain characterization of Bacillus subtilis GabR, a pyridoxal 5′-phosphate-dependent transcriptional regulator
    Okuda, Keita
    Ito, Tomokazu
    Goto, Masaru
    Takenaka, Takashi
    Hemmi, Hisashi
    Yoshimura, Tohru
    JOURNAL OF BIOCHEMISTRY, 2015, 158 (03): : 225 - 234
  • [35] Pyridoxal 5′-Phosphate-Dependent Enzymes at the Crossroads of Host-Microbe Tryptophan Metabolism
    Cellini, Barbara
    Zelante, Teresa
    Dindo, Mirco
    Bellet, Marina M.
    Renga, Giorgia
    Romani, Luigina
    Costantini, Claudio
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2020, 21 (16) : 1 - 21
  • [36] A periplasmic, pyridoxal-5′-phosphate-dependent amino acid racemase in Pseudomonas taetrolens
    Daisuke Matsui
    Tadao Oikawa
    Noriaki Arakawa
    Shintaro Osumi
    Frank Lausberg
    Norma Stäbler
    Roland Freudl
    Lothar Eggeling
    Applied Microbiology and Biotechnology, 2009, 83 : 1045 - 1054
  • [37] Stereochemical constraint in the evolution of pyridoxal-5'-phosphate-dependent enzymes. A hypothesis
    Christen, P
    Kasper, P
    Gehring, H
    Sterk, M
    FEBS LETTERS, 1996, 389 (01) : 12 - 14
  • [38] Structure of human cystathionine β-synthase:: a unique pyridoxal 5′-phosphate-dependent heme protein
    Meier, M
    Janosik, M
    Kery, V
    Kraus, JP
    Burkhard, P
    EMBO JOURNAL, 2001, 20 (15): : 3910 - 3916
  • [39] Functional properties of immobilized pyridoxal 5′-phosphate-dependent enzymes probed by absorption microspectrophotometry
    Mozzarelli, A
    Campanini, B
    Bettati, S
    Peracchi, A
    BIOCHEMISTRY AND MOLECULAR BIOLOGY OF VITAMIN B6 AND PQQ-DEPENDENT PROTEINS, 2000, : 349 - 354
  • [40] The structural basis of pyridoxal-5′-phosphate-dependent β-NAD-alkylating enzymes
    Awakawa, Takayoshi
    Mori, Takahiro
    Barra, Lena
    Ahmed, Yusef
    Ushimaru, Richiro
    Gao, Yaojie
    Adachi, Naruhiko
    Senda, Toshiya
    Terada, Tohru
    Tantillo, Dean J.
    Abe, Ikuro
    NATURE CATALYSIS, 2024, 7 (10): : 1099 - 1108