Cell-free RNA for the liquid biopsy of gastrointestinal cancer

被引:5
|
作者
Xing, Shaozhen [1 ,2 ]
Zhu, Yumin [3 ]
You, Yaxian [1 ]
Wang, Siqi [1 ]
Wang, Hongke [1 ]
Ning, Meng [1 ]
Jin, Heyue [3 ]
Liu, Zhengxia [4 ,5 ]
Zhang, Xinhua [6 ]
Yu, Chunzhao [4 ,5 ,7 ]
Lu, Zhi John [1 ,2 ,8 ]
机构
[1] Tsinghua Univ, Ctr Synthet & Syst Biol, Sch Life Sci, MOE Key Lab Bioinformat, Beijing, Peoples R China
[2] Tsinghua Univ, Inst Precis Med, Beijing, Peoples R China
[3] Anhui Med Univ, Anhui Prov Key Lab Populat Hlth & Aristogen, Dept Maternal & Child & Adolescent Hlth, MOE Key Lab Populat Hlth Life Cycle,Sch Publ Hlth, Hefei, Anhui, Peoples R China
[4] Nanjing Med Univ, SIR RUN RUN Hosp, Dept Gen Surg, Nanjing, Jiangsu, Peoples R China
[5] Nanjing Med Univ, Affiliated Hosp 2, Dept Geriatr, Nanjing, Jiangsu, Peoples R China
[6] Nanjing Med Univ, Jiangsu Women & Children Hlth Hosp, Affiliated Hosp 1, Jiangsu Prov Hosp,Dept Hlth Care, Nanjing, Jiangsu, Peoples R China
[7] Nanjing Med Univ, SIR RUN RUN Hosp, Dept Gen Surg, Nanjing 211166, Jiangsu, Peoples R China
[8] Tsinghua Univ, Ctr Synthet & Syst Biol, Sch Life Sci, MOE Key Lab Bioinformat, Beijing 100084, Peoples R China
基金
中国国家自然科学基金;
关键词
cfRNA; gastrointestinal cancer; liquid biopsy; PROGNOSTIC BIOMARKER; POTENTIAL BIOMARKER; MICRORNA EXPRESSION; NONCODING RNAS; MESSENGER-RNA; DIAGNOSTIC BIOMARKER; DOWN-REGULATION; GALLBLADDER CANCER; COLORECTAL-CANCER; CHROMOGRANIN-A;
D O I
10.1002/wrna.1791
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Gastrointestinal (GI) cancer includes many cancer types, such as esophageal, liver, gastric, pancreatic, and colorectal cancer. As the cornerstone of personalized medicine for GI cancer, liquid biopsy based on noninvasive biomarkers provides promising opportunities for early diagnosis and dynamic treatment management. Recently, a growing number of studies have demonstrated the potential of cell-free RNA (cfRNA) as a new type of noninvasive biomarker in body fluids, such as blood, saliva, and urine. Meanwhile, transcriptomes based on high-throughput RNA detection technologies keep discovering new cfRNA biomarkers. In this review, we introduce the origins and applications of cfRNA, describe its detection and qualification methods in liquid biopsy, and summarize a comprehensive list of cfRNA biomarkers in different GI cancer types. Moreover, we also discuss perspective studies of cfRNA to overcome its current limitations in clinical applications.This article is categorized under:RNA in Disease and Development > RNA in Disease
引用
收藏
页数:24
相关论文
共 50 条
  • [31] Exosomal microRNA in cell-free urine samples as a source for liquid prostate cancer biopsy
    Blondal, Thorarinn
    Thomsen, Anni R.
    Krummheuer, Jorg
    Borre, Michael
    Fredsoe, Jacob
    Haldrup, Christa
    Andreasen, Ditte
    Teilum, Maria W.
    Tolstrup, Niels
    Sorensen, Karina D.
    Orntoft, Torben F.
    Mouritzen, Peter
    CANCER RESEARCH, 2015, 75
  • [32] Current and Future Perspectives of Cell-Free DNA in Liquid Biopsy
    Liu, Shicai
    Wang, Jinke
    CURRENT ISSUES IN MOLECULAR BIOLOGY, 2022, 44 (06) : 2695 - 2709
  • [33] Epigenetic Biomarkers in Cell-Free DNA and Applications in Liquid Biopsy
    Gai, Wanxia
    Sun, Kun
    GENES, 2019, 10 (01)
  • [34] Enhanced cell-free RNA (cfRNA) recovery for liquid biopsy applications: Comparative analysis using controlled RNA samples for early and advanced cancer detection
    Jafari, Nafiseh
    Saidian, Mayer
    Saenz, Jason
    Dunnigan, Andrew
    Hernandez, Carlos
    Aghili, Leila
    CLINICAL CANCER RESEARCH, 2024, 30 (21)
  • [35] Multi-parametric liquid biopsy analysis of circulating tumor cells (CTCs), cell-free DNA (cfDNA), and cell-free RNA (cfRNA) in metastatic castrate resistant prostate cancer (mCRPC).
    Hodara, Emmanuelle
    Zainfeld, Daniel
    Morrison, Gareth
    Cunha, Alexander
    Xu, Yucheng
    Carpten, John D.
    Danenberg, Peter V.
    Dempsey, Paul W.
    Usher, Joshua
    Danenberg, Kathleen
    Bischoff, Farideh Z.
    Khurana, Aditi
    Cotter, Philip D.
    Moore, Mathew
    Gunn, Shelly
    Dorff, Tanya B.
    Quinn, David I.
    Goldkorn, Amir
    JOURNAL OF CLINICAL ONCOLOGY, 2018, 36 (06)
  • [36] Bile cell-free DNA as a powerful liquid biopsy of the somatic variants in biliary tract cancer
    Shen, Ningjia
    Zhang, Dadong
    Yin, Lei
    Qiu, Yinghe
    Liu, Jian
    Yu, Wenlong
    Fu, Xiaohui
    Zhu, Bin
    Xu, Xiaoya
    Duan, Anqi
    Chen, Zishuo
    Wang, Xiang
    Cao, Xinkai
    Zhao, Teng
    Zhou, Zisong
    Yu, Lianghe
    Qin, Hao
    Fang, Zheng
    Li, Jing-Yu
    Liu, Yuanjin
    Xiong, Lei
    Yuan, Bo
    Li, Fugen
    Zhang, Yongjie
    CANCER RESEARCH, 2019, 79 (13)
  • [37] Prognostic value of circulating HPV cell-free DNA in cervical cancer using liquid biopsy
    Gupta, Ashna
    Dagar, Gunjan
    Das, Sumit Kr.
    Chauhan, Ravi
    Shankar, Abhishek
    Sharma, Daya Nand
    Suri, Vaishali
    Khan, Maroof Ahmad
    Macha, Muzafar A.
    Ahmed, Ikhlak
    Akil, Ammira S. Al-Shabeeb
    Bhat, Ajaz A.
    Singh, Mayank
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [38] Advancements in bladder cancer detection: a comprehensive review on liquid biopsy and cell-free DNA analysis
    Rakshit, Indraneel
    Mandal, Sudeshna
    Pal, Sreejit
    Bhattacharjee, Pritha
    NUCLEUS-INDIA, 2024,
  • [39] Liquid biopsy in patients with pancreatic cancer: Circulating tumor cells and cell-free nucleic acids
    Imamura, Taisuke
    Komatsu, Shuhei
    Ichikawa, Daisuke
    Kawaguchi, Tsutomu
    Miyamae, Mahito
    Okajima, Wataru
    Ohashi, Takuma
    Arita, Tomohiro
    Konishi, Hirotaka
    Shiozaki, Atsushi
    Morimura, Ryo
    Ikoma, Hisashi
    Okamoto, Kazuma
    Otsuji, Eigo
    WORLD JOURNAL OF GASTROENTEROLOGY, 2016, 22 (25) : 5627 - 5641
  • [40] Liquid biopsy of gastric cancer patients:Circulating tumor cells and cell-free nucleic acids
    Masahiro Tsujiura
    Daisuke Ichikawa
    Hirotaka Konishi
    Shuhei Komatsu
    Atsushi Shiozaki
    Eigo Otsuji
    World Journal of Gastroenterology, 2014, (12) : 3265 - 3286