Combined Transcriptome and Metabolome Analysis of Smooth Muscle of Myostatin Knockout Cattle

被引:8
|
作者
Gu, Mingjuan [1 ,2 ]
Wang, Song [1 ,3 ]
Di, Anqi [1 ]
Wu, Di [1 ]
Hai, Chao [1 ]
Liu, Xuefei [1 ]
Bai, Chunling [1 ]
Su, Guanghua [1 ]
Yang, Lei [1 ]
Li, Guangpeng [1 ]
机构
[1] Inner Mongolia Univ, Coll Life Sci, State Key Lab Reprod Regulat & Breeding Grassland, Hohhot 010021, Peoples R China
[2] Inner Mongolia Agr Univ, Coll Anim Sci, Hohhot 010018, Peoples R China
[3] Northeast Agr Univ, Coll Life Sci, Harbin 150030, Peoples R China
关键词
myostatin; knockout; transcriptomics; metabolomics; combined analysis; cattle; smooth muscle; SPECTROMETRY DATA; MUTATIONS; MASS; PERFORMANCE;
D O I
10.3390/ijms24098120
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Myostatin (MSTN), a growth and differentiation factor, plays an important role in regulating skeletal muscle growth and development. MSTN knockout (MSTN-KO) leads to skeletal muscle hypertrophy and regulates metabolic homeostasis. Moreover, MSTN is also detected in smooth muscle. However, the effect of MSTN-KO on smooth muscle has not yet been reported. In this study, combined metabolome and transcriptome analyses were performed to investigate the metabolic and transcriptional profiling in esophageal smooth muscles of MSTN-KO Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 608.5 +/- 17.62 kg) and wild-type (WT) Chinese Luxi Yellow cattle (n = 5, 24 months, average body weight 528.25 +/- 11.03 kg). The transcriptome was sequenced using the Illumina Novaseq (TM) 6000 sequence platform. In total, 337 significantly up-and 129 significantly down-regulated genes were detected in the MSTN-KO cattle compared with the WT Chinese Luxi Yellow cattle. Functional enrichment analysis indicated that the DEGs were mainly enriched in 67 signaling pathways, including cell adhesion molecules, tight junction, and the cGMP-PKG signaling pathway. Metabolomics analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS) identified 130 differential metabolites between the groups, with 56 up-regulated and 74 down-regulated in MSTN knockout cattle compared with WT cattle. Differential metabolites were significantly enriched in 31 pathways, including glycerophospholipid metabolism, histidine metabolism, glutathione metabolism, and purine metabolism. Transcriptome and metabolome were combined to analyze the significant enrichment pathways, and there were three metabolically related pathways, including histidine metabolism, purine metabolism, and arginine and proline metabolism. These results provide important references for in-depth research on the effect of MSTN knockout on smooth muscle.
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页数:15
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