Biological Sequence Classification Using Deep Learning Architectures

被引:0
|
作者
Sivasubramanian, Arrun [1 ]
Prashanth, V. R. [1 ]
Kumar, S. Sachin [1 ]
Soman, K. P. [1 ]
机构
[1] Amrita Vishwa Vidyapeetham, Amrita Sch Engn, Ctr Computat Engn & Networking, Coimbatore, Tamil Nadu, India
关键词
Bio sequence; Perceptron; CNN; BiLSTM; GRU; SARS; SARS-CoV-2; MERS;
D O I
10.1007/978-981-19-2821-5_44
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Finding similar biological sequences to categorize into respective families is an important task. The present works attempt to use machine learning-based approaches to find the family of a given sequence. The first task in this direction is to convert the sequences to vector representations and then train a model using a suitable machine learning architecture. The second task is to find which family the sequence belongs to. In this work, deep learning-based architectures are proposed to do the task. A comparative study on how effective various deep learning architectures for this problem is also discussed in this work.
引用
收藏
页码:529 / 537
页数:9
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