Rapid detection of human adenovirus subgroup B using recombinase polymerase amplification assay

被引:0
|
作者
Zhu, Yongzhe [1 ]
Xia, Binghui [1 ]
Xu, Haizhou [2 ]
Liu, Zengxin [3 ]
Wang, Ru [3 ]
Cai, Qingqing [3 ]
Zhao, Ping [1 ]
Qi, Zhongtian [1 ]
机构
[1] Naval Med Univ, Dept Microbiol, 800 Xiangyin Rd, Shanghai 200433, Peoples R China
[2] Naval Med Univ, Changhai Hosp, Dept Emergency, Shanghai 200433, Peoples R China
[3] Genoxor Med Sci & Technol Inc, Shanghai 201112, Peoples R China
关键词
Adenovirus; Human adenovirus subgroup B; HAdV B; Recombinase polymerase amplification assay; RPA; ACUTE RESPIRATORY-DISEASE; MOLECULAR EPIDEMIOLOGY; INFECTION; DIAGNOSIS; OUTBREAKS; ILLNESS; CHINA; PCR;
D O I
10.1007/s11262-023-02044-5
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Human adenovirus subgroup B (HAdV B) is one of the major pathogens of human respiratory virus infections, which has considerable transmission and morbidity in a variety of populations. Therefore, rapid and specific detection of HAdV B in clinical samples is essential for diagnosis. This study aimed to develop a product for rapid nucleic acid detection of HAdV B using recombinase polymerase amplification assay (RPA) and validate the performance of this method by using clinical samples. Results showed that this method achieved a lower limit of detection (LOD) of 10 copies/mu L and had no cross-reactivity with other adenovirus subgroups or respiratory pathogens. In addition to high sensitivity, it can be completed within 30 min at 40 degrees C. There is no need to perform nucleic acid extraction on clinical samples. Taking qPCR as the gold standard, the RPA assay possessed a high concordance (Cohen's kappa, 0.896; 95% CI 0.808-0.984; P < 0.001), with a sensitivity of 87.80% and a specificity of 100.00%. The RPA assay developed in this study provided a simple and highly specific method, making it an important tool for rapid adenovirus nucleic acid detection and facilitating large-scale population screening in resource-limited settings.
引用
收藏
页码:18 / 24
页数:7
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