Pathogenicity of PKCγ Genetic Variants-Possible Function as a Non-Invasive Diagnostic Biomarker in Ovarian Cancer

被引:2
|
作者
Shahid, Kanza [1 ]
Khan, Khushbukhat [1 ]
Badshah, Yasmin [1 ]
Ashraf, Naeem Mahmood [2 ]
Hamid, Arslan [3 ]
Trembley, Janeen H. H. [4 ,5 ,6 ]
Shabbir, Maria [1 ]
Afsar, Tayyaba [7 ]
Almajwal, Ali [7 ]
Abusharha, Ali [8 ]
Razak, Suhail [7 ]
机构
[1] Natl Univ Sci & Technol, Atta Ur Rahman Sch Appl Biosci, Dept Healthcare Biotechnol, Islamabad 44010, Pakistan
[2] Univ Punjab, Sch Biochem & Biotechnol, Lahore 54590, Pakistan
[3] Univ Bonn, LIMES Inst AG Netea, Carl Troll Str 31, D-53115 Bonn, Germany
[4] Minneapolis VA Hlth Care Syst Res Serv, Minneapolis, MN 55417 USA
[5] Univ Minnesota, Dept Lab Med & Pathol, Minneapolis, MN 55455 USA
[6] Univ Minnesota, Masonic Canc Ctr, Minneapolis, MN 55455 USA
[7] King Saud Univ, Coll Appl Med Sci, Dept Community Hlth Sci, Riyadh 11362, Saudi Arabia
[8] King Saud Univ, Coll Appl Med Sci, Dept Optometry, Riyadh 11362, Saudi Arabia
关键词
protein kinase c-gamma (PKC gamma); ovarian cancer; protein-protein docking; molecular dynamics simulation; SINGLE-NUCLEOTIDE POLYMORPHISMS; C-BETA INHIBITOR; PROSTATE-CANCER; BREAST-CANCER; PROTEIN; PHOSPHORYLATION; ASSOCIATION; EXPRESSION; CONNEXIN43; PATHWAYS;
D O I
10.3390/genes14010236
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Ovarian cancer has the highest mortality rate among gynecologic malignancies, owing to its misdiagnosis or late diagnosis. Identification of its genetic determinants could improve disease outcomes. Conventional Protein Kinase C-gamma (PKC gamma) dysregulation is reported in several cancers. Similarly, its variant rs1331262028 is also reported to have an association with hepatocellular carcinoma. Therefore, the aim of the present study was to analyze the variant rs1331262028 association with ovarian cancer and to determine its impact on PKC gamma's protein interactions. Association of variation was determined through genotyping PCR (cohort size:100). Protein-protein docking and molecular dynamic simulation were carried out to study the variant impact of PKC gamma interactions. The study outcome indicated the positive association of variant rs1331262028 with ovarian cancer and its clinicopathological features. Molecular dynamics simulation depicted the potential influence of variation on PKC gamma molecular signaling. Hence, this study provided the foundations for assessing variant rs1331262028 as a potential prognostic marker for ovarian cancer. Through further validation, it can be applied at the clinical level.
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页数:16
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