Enantioselectivity and origin of enhanced efficiency in polyethylene terephthalate hydrolases catalyzed depolymerization

被引:5
|
作者
Zheng, Mingna [1 ]
Li, Yanwei [1 ,2 ]
Dong, Weiliang [3 ]
Zhang, Qingzhu [1 ]
Wang, Wenxing [1 ]
机构
[1] Shandong Univ, Environm Res Inst, Qingdao 266237, Peoples R China
[2] Shandong Univ, Shenzhen Res Inst, Shenzhen 518057, Peoples R China
[3] Nanjing Tech Univ, Coll Biotechnol & Pharmaceut Engn, State Key Lab Mat Oriented Chem Engn, Nanjing 211800, Peoples R China
基金
中国国家自然科学基金;
关键词
Polyethylene terephthalate; Hydrolases; Quantum mechanics/molecular mechanics; Enantioselectivity; Biological recycling; Enzyme engineering; MOLECULAR-DYNAMICS; POLY(ETHYLENE-TEREPHTHALATE); REACTIVITY; MECHANISM; PROGRAM; DESIGN; CHARMM;
D O I
10.1016/j.jhazmat.2023.131295
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Biotechnology is one of the most promising strategies to resolve the global crisis of plastic pollution. A clear under-standing of the core enzyme mechanisms in the biotransformation process is critical for rational enzyme engineering and for practical, industrial-scale applications. Herein, we systematically examined and evidenced a largely unex-plored piece in the depolymerization mechanism catalyzed by polyethylene terephthalate (PET) hydrolases: their enantioselectivity. We found that all the short-lived tetrahedron intermediates (IM3 and IM8) possess S-type chirality in six representative PET hydrolases. For instance, the binding percentage ratio of pro-S:pro-R is 57:21 in FAST-PETase, while pro -S binding leads to a much lower average energy barrier (5.2 kcal/mol) than pro -R binding (33.1 kcal/mol). Key structural features (e.g. the angle for Ser@H1-His@N1-PET@O2 and distance for His@N1-PET@O2) that significantly modulate the enantioselectivity were identified. The origin of the energy landscape variation between wild-type IsPETase and mutant FAST-PETase was also unveiled via analysis of key features, the distortion/interaction energy, and non-covalent bond interactions. This study supplies the missing piece in the mechanism for depolymerization catalyzed by PET hydrolases, and will aid in the rational design of enzymes for industrial recycling of PET plastic waste.
引用
收藏
页数:8
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