The complete mitochondrial genome of water flea Ceriodaphnia dubia (Crustacea: Cladocera) NIES strain

被引：0

作者：

Hiki, Kyoshiro ^{[1
]}

Oka, Kenta ^{[1
]}

Nakajima, Nobuyoshi ^{[2
]}

Watanabe, Haruna ^{[1
]}

Yamamoto, Hiroshi ^{[1
]}

Yamagishi, Takahiro ^{[1
]}

机构：

[1] Natl Inst Environm Studies, Hlth & Environm Risk Div, Tsukuba, Ibaraki, Japan

[2] Natl Inst Environm Studies, Biodivers Div, Tsukuba, Ibaraki, Japan

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 08期

关键词：

Daphnids; cladocerans; Ceriodaphnia; mitogenome; BRANCHIOPODA; VISUALIZATION; PERFORMANCE; SEQUENCE; SARS;

D O I：

10.1080/23802359.2023.2241663

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Water flea Ceriodaphnia dubia has been widely used for risk assessments of chemicals and environmental contamination. In this study, the complete mitochondrial genome (mitogenome) of this species NIES strain was determined using short-read high throughput and long-read sequencing technologies. The mitogenome of C. dubia was 15,170 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), and 22 transfer RNAs (tRNAs). The gene order was identical to the pattern conserved across crustaceans. The complete mitogenome of the NIES strain will serve as genetical reference in ecological risk assessments in Japan, as well as resources for future phylogenetical studies using cladocerans.

引用

页码：831 / 835

页数：5

共 50 条

[41] The complete mitochondrial genome of Artemia salina Leach, 1819 (Crustacea: Anostraca)
Deji, Gusang
Zhang, Chi
Sui, Liying
Han, Xuekai
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3255 - 3256
[42] The complete mitochondrial genome ofJesogammarus(Jesogammarus)hinumensis(Crustacea: Amphipoda: Anisogammaridae)
Lee, Chi-Woo
Tomikawa, Ko
Min, Gi-Sik
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2436 - 2437
[43] The complete mitochondrial genome of the rodent flea Nosopsyllus laeviceps: genome description, comparative analysis, and phylogenetic implications
Fu, Yi-Tian
Xun, Ying
Peng, Yan-Yan
Zhang, Yu
Wu, Xiang
PARASITES & VECTORS, 2024, 17 (01):
[44] The mitochondrial genome of Diaphanosoma excisum Sars, 1885 (Crustacea: Branchiopoda: Cladocera) from Hainan Island, China
Pan, Jiaying
Liu, Ping
Pajk, Franja
Dumont, Henri J.
Han, Bo-Ping
MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 1279 - 1280
[45] The water flea Daphnia magna (Crustacea, Cladocera) as a test species for screening and evaluation of chemicals with endocrine disrupting effects on crustaceans
Tatarazako, Norihisa
Oda, Shigeto
ECOTOXICOLOGY, 2007, 16 (01) : 197 - 203
[46] The water flea Daphnia magna (Crustacea, Cladocera) as a test species for screening and evaluation of chemicals with endocrine disrupting effects on crustaceans
Norihisa Tatarazako
Shigeto Oda
Ecotoxicology, 2007, 16 : 197 - 203
[47] Identification of putative peptide paracrines/hormones in the water flea Daphnia pulex (Crustacea; Branchiopoda; Cladocera) using transcriptomics and immunohistochemistry
Gard, Ashley L.
Lenz, Petra H.
Shaw, Joseph R.
Christie, Andrew E.
GENERAL AND COMPARATIVE ENDOCRINOLOGY, 2009, 160 (03) : 271 - 287
[48] The complete mitochondrial genome of Pollicipes mitella (Crustacea, Maxillopoda, Cirripedia):: Non-monophylies of Maxillopoda and Crustacea
Lim, Jong Tae
Hwang, Ui Wook
MOLECULES AND CELLS, 2006, 22 (03) : 314 - 322
[49] Complete mitochondrial genome of Ovalona pulchella (Branchiopoda, Cladocera) as the first representative in the family Chydoridae: Gene rearrangements and phylogenetic analysis of Cladocera
Gu, Yang-Liang
Sun, Cheng-He
Liu, Ping
Zhang, Xiaoli
Sinev, Artem Y.
Dumont, Henri J.
Han, Bo-Ping
GENE, 2022, 818
[50] Complete mitochondrial genome of Palaemon gravieri (Yu, 1930) (Crustacea: Decapoda: Palaemonidae)
Kim, Sung-Tae
Kim, Gyungryul
Yoon, Tae-Ho
Kim, Ah-Ran
Kim, Hak Jun
Kim, Hyun-Woo
MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) : 277 - 278

← 1 2 3 4 5 →