Comparative analysis of deeply phenotyped GBM cohorts of 'short-term' and 'long-term' survivors

被引：3

作者：

Biswas, Archita ^{[1
]}

Salvucci, Manuela ^{[1
]}

Connor, Kate ^{[1
]}

Dussmann, Heiko ^{[1
]}

Carberry, Steven ^{[1
]}

Fichtner, Michael ^{[1
]}

King, Ellen ^{[1
]}

Murphy, Brona ^{[1
]}

O'Farrell, Alice C. ^{[1
]}

Cryan, Jane ^{[2
]}

Beausang, Alan ^{[2
]}

Heffernan, Josephine ^{[2
]}

Cremona, Mattia ^{[3
,4
]}

Hennessy, Bryan T. ^{[3
,4
]}

Clerkin, James ^{[1
,5
]}

Sweeney, Kieron J. ^{[5
]}

MacNally, Steve ^{[5
]}

Brett, Francesca ^{[2
]}

O'Halloran, Philip ^{[5
]}

Bacon, Orna ^{[1
]}

Furney, Simon ^{[1
]}

Verreault, Maite ^{[6
]}

Quissac, Emie ^{[6
]}

Bielle, Franck ^{[6
]}

Ahmed, Mohammed H. ^{[6
]}

Idbaih, Ahmed ^{[6
]}

Leenstra, Sieger ^{[7
]}

Ntafoulis, Ioannis ^{[7
]}

Fabro, Federica ^{[7
]}

Lamfers, Martine ^{[7
]}

Golebiewska, Anna ^{[8
]}

Hertel, Frank ^{[8
,12
]}

Niclou, Simone P. ^{[8
,12
]}

Yen, Romain Tching Chi ^{[9
]}

Kremer, Andreas ^{[9
]}

Dilcan, Gonca ^{[10
]}

Lodi, Francesca ^{[10
]}

Arijs, Ingrid ^{[10
]}

Lambrechts, Diether ^{[10
]}

Purushothama, Manasa Kalya ^{[11
]}

Kel, Alexander ^{[11
]}

Byrne, Annette T. ^{[1
]}

Prehn, Jochen H. M. ^{[1
]}

机构：

[1] Royal Coll Surgeons Ireland, Ctr Syst Med, Dept Physiol & Med Phys, 123 St Stephens Green, Dublin D02 YN77 2, Ireland

[2] Beaumont Hosp, Dept Neuropathol, Dublin 9, Ireland

[3] Royal Coll Surgeons Ireland, Dept Med, Dublin 9, Ireland

[4] Beaumont Hosp, Dublin 9, Ireland

[5] Beaumont Hosp, Dept Neurosurg, Dublin 9, Ireland

[6] Sorbonne Univ, Hop Univ La Pitie Salpetriere Charles Foix, AP HP,ICM,Inserm, Inst Cerveau,Paris Brain Inst,DMU Neurosci,CNRS, F-75013 Paris, France

[7] Erasmus Univ, Dept Neurosurg, Brain Tumor Ctr, Med Ctr, Wytemaweg 80, NL-3015 CN Rotterdam, Netherlands

[8] Luxembourg Inst Hlth, Dept Canc Res, NORLUX Neurooncol Lab, 6A,Rue Nicolas Ernest Barble, L-1210 Luxembourg, Luxembourg

[9] Informat Technol Translat Med, 27 Rue Henri Koch House Biohlth, L-4354 Esch Sur Alzette, Luxembourg

[10] Katholieke Univ Leuven, Canc Canc Biol, VIB, Onderwijs Navorsing 5,Herestr 49, B-3000 Leuven, Belgium

[11] GeneXplain GmbH, Am Exer 19b, D-38302 Wolfenbuttel, Germany

[12] Univ Luxembourg, Fac Sci Technol & Med, L-4365 Esch Sur Alzette, Luxembourg

来源：

JOURNAL OF NEURO-ONCOLOGY | 2023年 / 163卷 / 02期

关键词：

Glioblastoma; Reverse phase protein array; RNA-sequencing; Transcriptomics; Cilium; Cell cycle; Apoptosis; Short term survivors; Long term survivors; TUMOR MICROENVIRONMENT; EXPRESSION; IDENTIFICATION; PROGNOSIS; EVOLUTION; HYPOXIA; PATHWAY; GROWTH; ROLES;

D O I：

10.1007/s11060-023-04341-3

中图分类号：

R73 [肿瘤学];

学科分类号：

100214 ;

摘要：

Background Glioblastoma (GBM) is an aggressive brain cancer that typically results in death in the first 15 months after diagnosis. There have been limited advances in finding new treatments for GBM. In this study, we investigated molecular differences between patients with extremely short (= 9 months, Short term survivors, STS) and long survival (= 36 months, Long term survivors, LTS).Methods Patients were selected from an in-house cohort (GLIOTRAIN-cohort), using defined inclusion criteria (Karnofsky score > 70; age < 70 years old; Stuppprotocol as first line treatment, IDH wild type), and a multiomic analysis of LTS and STS GBM samples was performed. Results Transcriptomic analysis of tumour samples identified cilium gene signatures as enriched in LTS. Moreover, Immunohistochemical analysis confirmed the presence of cilia in the tumours of LTS. Notably, reverse phase protein array analysis (RPPA) demonstrated increased phosphorylated GAB1 (Y627), SRC (Y527), BCL2 (S70) and RAF (S338) protein expres-sion in STS compared to LTS. Next, we identified 25 unique master regulators (MR) and 13 transcription factors (TFs) belonging to ontologies of integrin signalling and cell cycle to be upregulated in STS.Conclusion Overall, comparison of STS and LTS GBM patients, identifies novel biomarkers and potential actionable therapeutic targets for the management of GBM.

引用

页码：327 / 338

页数：12

共 50 条

[21] AN ANALYSIS OF POSSIBLE PROGNOSTIC FEATURES OF LONG-TERM AND SHORT-TERM SURVIVORS OF METASTATIC BREAST-CANCER
VINCENT, MD
POWLES, TJ
SKEET, R
ASHLEY, S
COOMBES, RC
GIBB, J
CLARKE, S
THOMAS, HL
ADCOCK, H
[J]. EUROPEAN JOURNAL OF CANCER & CLINICAL ONCOLOGY, 1986, 22 (09): : 1059 - 1065
[22] Genomic expression patterns distinguish long-term from short-term glioblastoma survivors
Marko, Nicholas
Toms, Steven
Barnett, Gene
Weil, Robert
[J]. NEURO-ONCOLOGY, 2007, 9 (04) : 499 - 499
[23] Effect of riluzole on weight in short-term and long-term survivors of amyotrophic lateral sclerosis
Thakor, Kinjal
Naud, Shelly
Howard, Diantha
Tandan, Rup
Waheed, Waqar
[J]. AMYOTROPHIC LATERAL SCLEROSIS AND FRONTOTEMPORAL DEGENERATION, 2021, 22 (5-6) : 360 - 367
[24] A QUALITATIVE STUDY OF STROKE SURVIVORS' PERCEPTIONS OF SHORT-TERM AND LONG-TERM REHABILITATION NEEDS
Chau, J. P. C.
Lo, S. H. S.
Butt, L.
Liang, S.
[J]. INTERNATIONAL JOURNAL OF STROKE, 2022, 17 (3_SUPPL) : 270 - 270
[25] Quantitative assessment of mtDNA damage differentiates long-term and short-term survivors with glioblastoma
Kaldjian, Eric P.
Han, Ying
Shandilya, Harini
Gerard, Gary F.
Gunselman, Sandra
Cohen, Bruce H.
Weil, Robert J.
[J]. CANCER RESEARCH, 2010, 70
[26] Quantitative assessment of mtDNA damage differentiates long-term and short-term survivors with glioblastoma
Kaldjian, Eric P.
Han, Ying
Shandilya, Harini
Gerard, Gary F.
Gunselman, Sandra
Cohen, Bruce H.
Weil, Robert J.
[J]. CANCER RESEARCH, 2010, 70
[27] Genome-wide methylation analysis in long-term survivors of glioblastoma (GBM).
Chau, Justin
Dhungana, Neha
Kohlmeyer, Jordan
Petronek, Michael
Quelle, Dawn
Sato, Mariko
Darbro, Benjamin
Jones, Karra
Monga, Varun
[J]. JOURNAL OF CLINICAL ONCOLOGY, 2020, 38 (15)
[28] Short-term trials and long-term effects
Daniels, SR
[J]. SCIENCE, 2001, 293 (5539) : 2392 - 2392
[29] Short-term or long-term labor contracts
Bárcena-Ruiz, JC
Campo, ML
[J]. LABOUR ECONOMICS, 2000, 7 (03) : 249 - 260
[30] Short-term Safety and Long-term Competence
Saultz, John
[J]. FAMILY MEDICINE, 2012, 44 (02) : 81 - 82

← 1 2 3 4 5 →