Computational Model Study of the Experimentally Suggested Mechanism for Nitrogenase

被引:2
|
作者
Siegbahn, Per E. M. [1 ]
机构
[1] Stockholm Univ, Dept Organ Chem, Arrhenius Lab, SE-10691 Stockholm, Sweden
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2024年 / 128卷 / 04期
基金
瑞典研究理事会;
关键词
CENTRAL CARBON; QUANTUM; INTERMEDIATE; EXCHANGE; E-4; N-2;
D O I
10.1021/acs.jpcb.3c07675
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The mechanism for N-2 activation in the E-4 state of nitrogenase was investigated by model calculations. In the experimentally suggested mechanism, the E-4 state is obtained after four reductions to the ground state. In a recent theoretical study, results for a different mechanism have been found in excellent agreement with available Electron Paramagnetic Resonance (EPR) experiments for E-4. The two hydrides in E-4 leave as H-2 concertedly with the binding of N-2. The mechanism suggested differs from the experimentally suggested one by a requirement for four activation steps prior to catalysis. In the present study, the experimentally suggested mechanism is studied using the same methods as those used in the previous study on the theoretical mechanism. The computed results make it very unlikely that a structure obtained after four reductions from the ground state has two hydrides, and the experimentally suggested mechanism does therefore not agree with the EPR experiments for E-4. Another structure with only one hydride is here suggested to be the one that has been observed to bind N-2 after only four reductions of the ground state.
引用
收藏
页码:985 / 989
页数:5
相关论文
共 50 条
  • [31] A suggested mechanism for antiknock action
    Wendt, GL
    Grimm, FV
    INDUSTRIAL AND ENGINEERING CHEMISTRY, 1924, 16 : 890 - 893
  • [32] SUGGESTED EMISSION MECHANISM FOR PCLS
    CRYSTAL, TL
    TRANSACTIONS-AMERICAN GEOPHYSICAL UNION, 1974, 55 (12): : 1178 - 1178
  • [33] Perspectives on the mechanism of ATP hydrolysis by nitrogenase
    Krause, SO
    Gutheil, WG
    Simeonov, AM
    Matsunaga, TO
    Stauber, MJ
    Kenyon, GL
    McKenna, CE
    PHOSPHORUS SULFUR AND SILICON AND THE RELATED ELEMENTS, 1999, 144 : 513 - 516
  • [34] Advancing a Mechanism for Nitrogen Fixation by Nitrogenase
    Hoffman, B.
    Lukoyanov, D.
    Seefeldt, L.
    Dean, D.
    JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 2014, 19 : S85 - S85
  • [35] Mechanism of Mo-Dependent Nitrogenase
    Seefeldt, Lance C.
    Hoffman, Brian M.
    Dean, Dennis R.
    ANNUAL REVIEW OF BIOCHEMISTRY, 2009, 78 : 701 - 722
  • [36] Decoding the Nitrogenase Mechanism: The Homologue Approach
    Hu, Yilin
    Ribbe, Markus W.
    ACCOUNTS OF CHEMICAL RESEARCH, 2010, 43 (03) : 475 - 484
  • [37] Experimentally Validated Computational Fluid Dynamics Model for Data Center With Active Tiles
    Athavale, Jayati
    Joshi, Yogendra
    Yoda, Minami
    JOURNAL OF ELECTRONIC PACKAGING, 2018, 140 (01)
  • [38] An experimentally driven coarse-grained computational model of the axonal cytoskeleton.
    Soheilypour, M.
    Peyro, M.
    Krieg, M.
    Fetter, R.
    Goodman, M. B.
    Mofrad, M.
    MOLECULAR BIOLOGY OF THE CELL, 2016, 27
  • [39] A suggested mechanism of class Be stars
    McLaughlin, DB
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1933, 19 : 44 - 49
  • [40] A SUGGESTED MECHANISM FOR ALUMINUM BIOTOXICITY
    FORBES, WF
    AGWANI, N
    JOURNAL OF THEORETICAL BIOLOGY, 1994, 171 (02) : 207 - 214