Diagnosis of invasive fungal infections: challenges and recent developments

被引:100
|
作者
Fang, Wenjie [1 ]
Wu, Junqi [2 ,3 ]
Cheng, Mingrong [4 ]
Zhu, Xinlin [1 ]
Du, Mingwei [1 ]
Chen, Chang [2 ,3 ]
Liao, Wanqing [1 ]
Zhi, Kangkang [5 ]
Pan, Weihua [1 ]
机构
[1] Naval Med Univ, Dept Dermatol, Shanghai Key Lab Mol Med Mycol, Affiliated Hosp 2, Shanghai 200003, Peoples R China
[2] Tongji Univ, Shanghai Pulm Hosp, Dept Thorac Surg, Sch Med, Shanghai 200433, Peoples R China
[3] Shanghai Engn Res Ctr Lung Transplantat, Shanghai 200433, Peoples R China
[4] Guizhou Med Univ, Dept Anorectal Surg, Affiliated Hosp 3, Guizhou 558000, Peoples R China
[5] Naval Med Univ, Dept Vasc & Endovasc Surg, Affiliated Hosp 2, Shanghai 200003, Peoples R China
基金
中国国家自然科学基金;
关键词
Invasive fungal infections; Fungal diagnostics; Mycology; Detection; PCR; Candidiasis; REAL-TIME PCR; BETA-D-GLUCAN; PNEUMOCYSTIS-CARINII-PNEUMONIA; LATERAL FLOW ASSAY; ASPERGILLUS-FUMIGATUS; CRYPTOCOCCAL MENINGITIS; BRONCHOALVEOLAR LAVAGE; CANDIDA-ALBICANS; ELECTROCHEMICAL BIOSENSORS; HEMATOLOGICAL MALIGNANCIES;
D O I
10.1186/s12929-023-00926-2
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
BackgroundThe global burden of invasive fungal infections (IFIs) has shown an upsurge in recent years due to the higher load of immunocompromised patients suffering from various diseases. The role of early and accurate diagnosis in the aggressive containment of the fungal infection at the initial stages becomes crucial thus, preventing the development of a life-threatening situation. With the changing demands of clinical mycology, the field of fungal diagnostics has evolved and come a long way from traditional methods of microscopy and culturing to more advanced non-culture-based tools. With the advent of more powerful approaches such as novel PCR assays, T2 Candida, microfluidic chip technology, next generation sequencing, new generation biosensors, nanotechnology-based tools, artificial intelligence-based models, the face of fungal diagnostics is constantly changing for the better. All these advances have been reviewed here giving the latest update to our readers in the most orderly flow.Main textA detailed literature survey was conducted by the team followed by data collection, pertinent data extraction, in-depth analysis, and composing the various sub-sections and the final review. The review is unique in its kind as it discusses the advances in molecular methods; advances in serology-based methods; advances in biosensor technology; and advances in machine learning-based models, all under one roof. To the best of our knowledge, there has been no review covering all of these fields (especially biosensor technology and machine learning using artificial intelligence) with relevance to invasive fungal infections.ConclusionThe review will undoubtedly assist in updating the scientific community's understanding of the most recent advancements that are on the horizon and that may be implemented as adjuncts to the traditional diagnostic algorithms.
引用
收藏
页数:35
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