In this review, we consider various aspects of enhancer functioning in the context of the 3D genome. Particular attention is paid to the mechanisms of enhancer-promoter communication and the significance of the spatial juxtaposition of enhancers and promoters in 3D nuclear space. A model of an activator chromatin compartment is substantiated, which provides the possibility of transferring activating factors from an enhancer to a promoter without establishing direct contact between these elements. The mechanisms of selective activation of individual promoters or promoter classes by enhancers are also discussed.
机构:
Korea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
Kim, Kyukwang
Jang, Insu
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Korea Res Inst Biosci & Biotechnol KRIBB, Korean Bioinformat Ctr, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
Jang, Insu
Kim, Mooyoung
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Korea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
Kim, Mooyoung
Choi, Jinhyuk
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Korea Res Inst Biosci & Biotechnol KRIBB, Korean Bioinformat Ctr, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
Choi, Jinhyuk
Kim, Min-Seo
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Korea Res Inst Biosci & Biotechnol KRIBB, Korean Bioinformat Ctr, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
Kim, Min-Seo
Lee, Byungwook
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Korea Res Inst Biosci & Biotechnol KRIBB, Korean Bioinformat Ctr, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
Lee, Byungwook
Jung, Inkyung
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Korea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South KoreaKorea Adv Inst Sci & Technol KAIST, Dept Biol Sci, Daejeon 34141, South Korea
机构:
Max Delbruck Ctr Mol Med, Epigenet & Sex Dev Grp, Berlin Inst Med Syst Biol, Berlin, GermanyUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
Lupianez, Dario G.
Mundlos, Stefan
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Max Planck Inst Mol Genet, RG Dev & Dis, Berlin, Germany
Charite, Inst Med & Human Genet, Berlin, GermanyUniv Washington, Dept Genome Sci, Seattle, WA 98195 USA
机构:
CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of SciencesCAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences