An integrative evaluation of circadian gene TIMELESS as a pan-cancer immunological and predictive biomarker

被引:1
|
作者
Yang, Yaocheng [1 ]
Tang, Xianzhe [2 ]
Lin, Zhengjun [1 ]
Zheng, Tao [1 ]
Zhang, Sheng [3 ]
Liu, Tang [1 ]
Yang, Xiaolun [4 ]
机构
[1] Cent South Univ, Xiangya Hosp 2, Dept Orthoped, 136 Renmin Middle Rd, Changsha 410011, Hunan, Peoples R China
[2] Chenzhou First Peoples Hosp, Dept Orthoped, Chenzhou, Hunan, Peoples R China
[3] Cent South Univ, Xiangya Hosp 2, Dept Oral & Maxillofacial Surg, Changsha, Hunan, Peoples R China
[4] Cent South Univ, Xiangya Hosp 2, Dept Stomatol, 136 Renmin Middle Rd, Changsha 410011, Hunan, Peoples R China
关键词
TIMELESS; Pan-cancer; Circadian rhythm; Prognosis; Immunological biomarker; DNA-REPLICATION; PATTERNS; PROTEIN; TIPIN;
D O I
10.1186/s40001-023-01519-3
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
BackgroundThe gene TIMELESS, which is involved in the circadian clock and the cell cycle, has recently been linked to various human cancers. Nevertheless, the association between TIMELESS expression and the prognosis of individuals afflicted with pan-cancer remains largely unknown.ObjectivesThe present study aims to exhaustively scrutinize the expression patterns, functional attributes, prognostic implications, and immunological contributions of TIMELESS across diverse types of human cancer.MethodsThe expression of TIMELESS in normal and malignant tissues was examined, as well as their clinicopathologic and survival data. The characteristics of genetic alteration and molecular subtypes of cancers were also investigated. In addition, the relationship of TIMELESS with immune infiltration, tumor mutation burden (TMB), microsatellite instability (MSI), and drug sensitivity was illustrated. Immunohistochemistry (IHC) was used to validate the expression of TIMELESS in clinical patients with several types of cancer.ResultsIn contrast to the matching normal controls, most tumor types were found to often overexpress TIMELESS. Abnormal expression of TIMELESS was significantly related to more advanced tumor stage and poorer prognosis of breast cancer, as well as infiltrating immune cells such as cancer-associated fibroblast infiltration in various tumors. Multiple cancer types exhibited abnormal expression of TIMELESS, which was also highly correlated with MSI and TMB. More crucially, TIMELESS showed promise in predicting the effectiveness of immunotherapy and medication sensitivity in cancer therapy. Moreover, cell cycle, DNA replication, circadian rhythm, and mismatch repair were involved in the functional mechanisms of TIMELESS on carcinogenesis. Furthermore, immunohistochemical results manifested that the TIMELESS expression was abnormal in some cancers.ConclusionsThis study provides new insights into the link between the circadian gene TIMELESS and the development of various malignant tumors. The findings suggest that TIMELESS could be a prospective prognostic and immunological biomarker for pan-cancer.
引用
收藏
页数:20
相关论文
共 50 条
  • [41] Pan-cancer analysis identifies SPEN mutation as a predictive biomarker with the efficacy of immunotherapy
    Li, Ya-Dong
    Huang, Hao
    Ren, Zheng-Ju
    Yuan, Ye
    Wu, Hao
    Liu, Chuan
    BMC CANCER, 2023, 23 (01)
  • [42] Prognostic value and immunological role of cathepsin S gene in pan-cancer
    Liang, Shengsheng
    Dang, Bowen
    Chen, Shaohua
    Mi, Hua
    ONCOLOGY LETTERS, 2024, 27 (01)
  • [43] Integrative analysis of circadian clock with prognostic and immunological biomarker identification in ovarian cancer
    Zhao, Lianfang
    Tang, Yuqin
    Yang, Jiayan
    Lin, Fang
    Liu, Xiaofang
    Zhang, Yongqiang
    Chen, Jianhui
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 10
  • [44] Pan-Cancer Analysis of the Prognostic and Immunological Role of SMG5: A biomarker for cancers
    Yang, Leteng
    Wei, Jie
    Ma, Xiaoya
    Cheng, Rui
    Zhang, Huan
    Jin, Tianbo
    ONCOLOGY, 2024, 102 (02) : 168 - 182
  • [45] Pan-cancer analysis: SPAG5 is an immunological and prognostic biomarker for multiple cancers
    Gao, Xiaofeng
    Bu, Huitong
    Gao, Xuzheng
    Wang, Ying
    Wang, Long
    Zhang, Zhenwang
    FASEB JOURNAL, 2023, 37 (10):
  • [46] Identification and validation of SERPINE1 as a prognostic and immunological biomarker in pan-cancer and in ccRCC
    Li, Lingqin
    Li, Fan
    Xu, Zhehao
    Li, Liyang
    Hu, Haiyi
    Li, Yang
    Yu, Shicheng
    Wang, Mingchao
    Gao, Lei
    FRONTIERS IN PHARMACOLOGY, 2023, 14
  • [47] Pan-cancer analyses identify DCBLD2 as an oncogenic, immunological, and prognostic biomarker
    Xie, Pan
    Liu, Jun-Yan
    Yan, Han
    Wang, Zhi-Bin
    Jiang, Shi-Long
    Li, Xi
    Liu, Zhao-Qian
    FRONTIERS IN PHARMACOLOGY, 2022, 13
  • [48] Pan-Cancer Analysis Reveals FH as a Potential Prognostic and Immunological Biomarker in Lung Adenocarcinoma
    Zhang, Heng
    Ju, Qiang
    Ji, Jing
    Zhao, Yanjie
    DISEASE MARKERS, 2021, 2021
  • [49] Allograft inflammatory factor 1 is a potential diagnostic, immunological, and prognostic biomarker in pan-cancer
    Liu, Xin
    Zhang, Dandan
    Hu, Jianping
    Xu, Sikai
    Xu, Chengyun
    Shen, Yang
    AGING-US, 2023, 15 (07): : 2582 - 2609
  • [50] ALDH2 as an immunological and prognostic biomarker: Insights from pan-cancer analysis
    Shen, Xiaorong
    Yan, Ziyi
    Huang, Yuanli
    Zhu, Qing
    Zhang, Guanghui
    Ci, Hongfei
    Wu, Qiong
    Wu, Ligao
    MEDICINE, 2024, 103 (16) : E37820