Identification of the Key Immune Cells and Genes for the Diagnostics and Therapeutics of Meningioma

被引:4
|
作者
Chen, Jiawei [1 ,2 ,3 ,4 ,5 ]
Hua, Lingyang [1 ,2 ,3 ,4 ,5 ]
Xu, Xiupeng [6 ]
Jiapaer, Zeyidan [7 ]
Deng, Jiaojiao [2 ,3 ,4 ,5 ]
Wang, Daijun [1 ,2 ,3 ,4 ,5 ]
Zhang, Lifeng [1 ,2 ,3 ,4 ,5 ]
Li, Guoping [8 ]
Gong, Ye [1 ,2 ,3 ,4 ,5 ,9 ]
机构
[1] Fudan Univ, Huashan Hosp, Shanghai Med Coll, Dept Neurosurg, Shanghai, Peoples R China
[2] Natl Ctr Neurol Disorders, Shanghai, Peoples R China
[3] Shanghai Key Lab Brain Funct Restorat & Neural Reg, Shanghai, Peoples R China
[4] Fudan Univ, Neurosurg Inst, Shanghai, Peoples R China
[5] Shanghai Clin Med Ctr Neurosurg, Shanghai, Peoples R China
[6] Nanjing Med Univ, Affiliated Hosp 1, Dept Neurosurg, Nanjing, Jiangsu, Peoples R China
[7] Xinjiang Univ, Coll Life Sci & Technol, Xinjiang Key Lab Biol Resources & Genet Engn, Urumqi, Peoples R China
[8] Harvard Med Sch, Massachusetts Gen Hosp, Cardiovasc Res Ctr, Boston, MA USA
[9] Fudan Univ, Huashan Hosp, Shanghai Med Coll, Dept Crit Care Med, Shanghai, Peoples R China
基金
中国国家自然科学基金;
关键词
ADCY1; Differentially expressed genes; Immune cell infiltration; Machine-learning; Meningioma; MODULATORY MOLECULE PD-L1; MAST-CELLS; CYCLASE; EXPRESSION; CANCER; TUMOR; ADCY1; ACTIVATION; BIOMARKERS; LANDSCAPE;
D O I
10.1016/j.wneu.2023.05.090
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
-BACKGROUND: Dysregulation of immune infiltration critically contributes to the tumorigenesis and progression of meningiomas. However, the landscape of immune microenvironment and key genes correlated with immune cell infiltration remains unclear. -METHODS: Four Gene Expression Omnibus data sets were included. CIBERSORT algorithm was utilized to analyze the immune cell infiltration in samples. Wilcoxon test, Random Forest algorithm, and Least Absolute Shrinkage and Selection Operator regression were adopted in identifying significantly different infiltrating immune cells and differentially expressed genes (DEGs). Functional enrichment analysis was performed by Kyoto Encyclopedia of Genes and Genomes and Gene Ontology. The correlation between genes and immune cells was evaluated via Spearman's correlation analysis. Receiver Operator Char-acteristic curve analysis evaluated the markers' diagnostic effectiveness. The mRNA-miRNA and Drug-Gene-Immune cell interaction networks were constructed to identify potential diagnostic and therapeutic targets. -CONCLUSIONS: ADCY1 can be identified as a diagnostic marker; ADCY1, BMX, KCNA5, SLCO4A1, and TTR are po-tential therapeutic targets, and their associations with macrophages, neutrophils, NK cells, and plasma cells might impact the tumorigenesis of meningiomas.
引用
收藏
页码:E501 / E514
页数:14
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