Identification and virtual screening of novel umami peptides from chicken soup by molecular docking

被引:65
|
作者
Zhang, Jingcheng [1 ]
Zhang, Jincheng [1 ]
Liang, Li [1 ]
Sun, Baoguo [1 ]
Zhang, Yuyu [1 ]
机构
[1] Beijing Technol & Business Univ BTBU, Beijing Key Lab Flavor Chem, Beijing 100048, Peoples R China
基金
中国国家自然科学基金;
关键词
Chicken soup; Umami peptide; Virtual screening; Molecular docking; ENHANCING PEPTIDES; TASTE; DISCOVERY; GLUTAMATE; SEQUENCE; RECEPTOR;
D O I
10.1016/j.foodchem.2022.134414
中图分类号
O69 [应用化学];
学科分类号
081704 ;
摘要
By combining python script invocation, the batch processing of molecular docking was achieved to screen 20 potential umami peptides out of the 208 peptides identified in chicken soup. Nine peptides were dominated by umami taste according to sensory analysis, among which PPQEAAQF (2.56) has the highest umami intensity, followed by AEEHVEAVN (2.43) and NEFGYSNR (2.19). The threshold of nine peptides ranged from 0.08 mM to 0.58 mM. In 0.35 % MSG, the effective threshold of umami-enhancing effect of LPLQD was 0.24 mM. In addition, the molecular docking results indicated that His71, Ser107, and Asp147 of taste receptor type 1 member 1, and Asn68, Asp216, His387, and Ala302 of taste receptor type 1 member 3 play critical roles in the binding with umami peptides by forming hydrogen bonds and hydrophobic force. Thus, the combination of molecular docking and python script invocation was effective and economical for umami peptides screening.
引用
收藏
页数:8
相关论文
共 50 条
  • [41] A strategy for screening novel umami dipeptides based on common feature pharmacophore and molecular docking
    Xiong, Yongzhao
    Gao, Xinchang
    Pan, Daodong
    Zhang, Ting
    Qi, Lulu
    Wang, Ning
    Zhao, Yufen
    Dang, Yali
    BIOMATERIALS, 2022, 288
  • [42] Combination of virtual screening, machine learning, molecular dynamics simulations and sensory evaluation to discover novel umami peptides from fermented Atlantic cod
    Zou, Hao
    Wang, Hao
    Zhao, Jinlong
    Feng, Hua
    Peng, Shanyu
    Liu, Qingwen
    Qin, Zhihui
    Zhang, Ziye
    Lin, Hong
    Li, Zhenxing
    FOOD BIOSCIENCE, 2024, 59
  • [43] Peptidomics Screening and Molecular Docking with Umami Receptors T1R1/T1R3 of Novel Umami Peptides from Oyster (Crassostrea gigas) Hydrolysates
    Zhang, Junwei
    Tu, Zongcai
    Wen, Pingwei
    Wang, Hui
    Hu, Yueming
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2023, 72 (01) : 634 - 646
  • [44] Decoding of novel umami peptides from corn fermented powder and its mechanism via multisensory techniques, virtual screening, and molecular simulation approaches
    Huang, Pimiao
    Zhao, Xu
    Fan, Quanlong
    Yang, Haizheng
    Ma, Shiyu
    Wang, Hengzhi
    Yu, Haitao
    Cui, Chun
    FOOD CHEMISTRY, 2025, 463
  • [45] Peptidomics Screening and Molecular Docking with Umami Receptors T1R1/T1R3 of Novel Umami Peptides from Oyster (Crassostrea gigas) Hydrolysates
    Zhang, Junwei
    Tu, Zongcai
    Wen, Pingwei
    Wang, Hui
    Hu, Yueming
    Journal of Agricultural and Food Chemistry, 2024, 72 (01) : 634 - 646
  • [46] Flavor Characteristics of Umami Peptides from Wuding Chicken Revealed by Molecular Dynamics Simulation
    Jia, Rong
    Yang, Yuan
    Liao, Guozhou
    Wu, Hongyan
    Yang, Chunfang
    Wang, Guiying
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2024, 72 (07) : 3673 - 3682
  • [47] Identification of umami peptides from Wuding chicken by Nano-HPLC-MS/MS and insights into the umami taste mechanisms
    Jia, Rong
    He, Ying
    Liao, Guozhou
    Yang, Zijiang
    Gu, Dahai
    Pu, Yuehong
    Huang, Ming
    Wang, Guiying
    FOOD RESEARCH INTERNATIONAL, 2023, 172
  • [48] In silico Screening for Identification of Novel Anti-malarial Inhibitors by Molecular Docking, Pharmacophore Modeling and Virtual Screening
    Batool, Sidra
    Khan, Zeshan Aslam
    Kamal, Warda
    Mushtaq, Gohar
    Kamal, Mohammad Amjad
    MEDICINAL CHEMISTRY, 2015, 11 (07) : 687 - 700
  • [49] Identification of Novel Src Inhibitors: Pharmacophore-Based Virtual Screening, Molecular Docking and Molecular Dynamics Simulations
    Zhang, Yi
    Zhang, Ting-jian
    Tu, Shun
    Zhang, Zhen-hao
    Meng, Fan-hao
    MOLECULES, 2020, 25 (18):
  • [50] Rapid screening of novel umami peptides in high-umami scored air-dried chicken under low-salt processing based on molecular sensory techniques
    Yu, Zhenzhen
    Liu, Mingzhen
    Xu, Ju
    Fan, Xiankang
    Wang, Wei
    Sun, Yangying
    Pan, Daodong
    FOOD BIOSCIENCE, 2024, 62