Differential gene expression patterns in ST-elevation Myocardial Infarction and Non-ST-elevation Myocardial Infarction
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作者:
Elahimanesh, Mohammad
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Elahimanesh, Mohammad
[1
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Shokri, Nafiseh
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Shokri, Nafiseh
[1
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Mahdinia, Elmira
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Mahdinia, Elmira
[1
]
Mohammadi, Payam
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Mohammadi, Payam
[1
]
Parvaz, Najmeh
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Parvaz, Najmeh
[1
]
Najafi, Mohammad
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Iran Univ Med Sci, Cellular & Mol Res Ctr, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Najafi, Mohammad
[1
,2
]
机构:
[1] Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
[2] Iran Univ Med Sci, Cellular & Mol Res Ctr, Tehran, Iran
The ST-elevation Myocardial Infarction (STEMI) and Non-ST-elevation Myocardial Infarction (NSTEMI) might occur because of coronary artery stenosis. The gene biomarkers apply to the clinical diagnosis and therapeutic decisions in Myocardial Infarction. The aim of this study was to introduce, enrich and estimate timely the blood gene profiles based on the high-throughput data for the molecular distinction of STEMI and NSTEMI. The text mining data (50 genes) annotated with DisGeNET data (144 genes) were merged with the GEO gene expression data (5 datasets) using R software. Then, the STEMI and NSTEMI networks were primarily created using the STRING server, and improved using the Cytoscape software. The high-score genes were enriched using the KEGG signaling pathways and Gene Ontology (GO). Furthermore, the genes were categorized to determine the NSTEMI and STEMI gene profiles. The time cut-off points were identified statistically by monitoring the gene profiles up to 30 days after Myocardial Infarction (MI). The gene heatmaps were clearly created for the STEMI (high-fold genes 69, low-fold genes 45) and NSTEMI (high-fold genes 68, low-fold genes 36). The STEMI and NSTEMI networks suggested the high-score gene profiles. Furthermore, the gene enrichment suggested the different biological conditions for STEMI and NSTEMI. The time cut-off points for the NSTEMI (4 genes) and STEMI (13 genes) gene profiles were established up to three days after Myocardial Infarction. The study showed the different pathophysiologic conditions for STEMI and NSTEMI. Furthermore, the high-score gene profiles are suggested to measure up to 3 days after MI to distinguish the STEMI and NSTEMI.
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Loma Linda Univ, Sch Med, Dept Emergency Med, 11234 Anderson St,MC A108, Loma Linda, CA 92354 USALoma Linda Univ, Sch Med, Dept Emergency Med, 11234 Anderson St,MC A108, Loma Linda, CA 92354 USA
机构:
Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Kheifets, Mark
Vaknin-Assa, Hana
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Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Vaknin-Assa, Hana
Greenberg, Gabriel
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Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Greenberg, Gabriel
Orvin, Katia
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Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Orvin, Katia
Assali, Abid
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Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Tel Aviv Univ, Fac Med, Meir Med Ctr, Dept Cardiol, Tel Aviv, Kfar Saba, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Assali, Abid
Kornowski, Ran
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Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
Kornowski, Ran
Perl, Leor
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Rabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, IsraelRabin Med Ctr, Dept Cardiol, 39 Zeev Jabotineky St, IL-4941492 Petah Tiqwa, Israel
机构:
Univ Michigan, Dept Internal Med, Div Cardiovasc Dis, Ann Arbor, MI 48109 USAUniv Michigan, Dept Internal Med, Div Cardiovasc Dis, Ann Arbor, MI 48109 USA
Bates, Eric R.
Menees, Daniel S.
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Univ Michigan, Dept Internal Med, Div Cardiovasc Dis, Ann Arbor, MI 48109 USAUniv Michigan, Dept Internal Med, Div Cardiovasc Dis, Ann Arbor, MI 48109 USA
机构:
St Georges Univ London, Populat Hlth Res Inst, London, England
St Georges Univ London, MRC PHE Ctr Environm & Hlth, London, EnglandSt Georges Univ London, Populat Hlth Res Inst, London, England
Butland, Barbara K.
WAtkinson, Richard
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St Georges Univ London, Populat Hlth Res Inst, London, England
St Georges Univ London, MRC PHE Ctr Environm & Hlth, London, EnglandSt Georges Univ London, Populat Hlth Res Inst, London, England
WAtkinson, Richard
Milojevic, Ai
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London Sch Hyg & Trop Med, Dept Social & Environm Hlth Res, London, EnglandSt Georges Univ London, Populat Hlth Res Inst, London, England
Milojevic, Ai
Heal, Mathew R.
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Univ Edinburgh, Sch Chem, Edinburgh, Midlothian, ScotlandSt Georges Univ London, Populat Hlth Res Inst, London, England
Heal, Mathew R.
Doherty, Ruth M.
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Univ Edinburgh, Sch Geosci, Edinburgh, Midlothian, ScotlandSt Georges Univ London, Populat Hlth Res Inst, London, England
Doherty, Ruth M.
Armstrong, Ben G.
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London Sch Hyg & Trop Med, Dept Social & Environm Hlth Res, London, EnglandSt Georges Univ London, Populat Hlth Res Inst, London, England
Armstrong, Ben G.
MacKenzie, Ian A.
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Univ Edinburgh, Sch Geosci, Edinburgh, Midlothian, ScotlandSt Georges Univ London, Populat Hlth Res Inst, London, England
MacKenzie, Ian A.
Vieno, Massimo
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Univ Edinburgh, Sch Geosci, Edinburgh, Midlothian, Scotland
NERC, Ctr Ecol & Hydrol, Penicuik, Midlothian, ScotlandSt Georges Univ London, Populat Hlth Res Inst, London, England
Vieno, Massimo
Lin, Chun
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Univ Edinburgh, Sch Chem, Edinburgh, Midlothian, ScotlandSt Georges Univ London, Populat Hlth Res Inst, London, England
Lin, Chun
Wilkinson, Paul
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London Sch Hyg & Trop Med, Dept Social & Environm Hlth Res, London, EnglandSt Georges Univ London, Populat Hlth Res Inst, London, England