Identification of diagnostic biomarkers for idiopathic pulmonary hypertension with metabolic syndrome by bioinformatics and machine learning

被引:5
|
作者
Lu, Wenzhang [1 ,2 ]
Huang, Jinbo [2 ]
Shen, Qin [2 ]
Sun, Fei [2 ]
Li, Jun [1 ,2 ]
机构
[1] Nantong Univ, Med Sch, Dept Resp & Crit Care Med, Affiliated Hosp, Nantong 226001, Peoples R China
[2] Nantong Univ, Dept Resp & Crit Care Med, Affiliated Hosp, Nantong 226001, Peoples R China
来源
SCIENTIFIC REPORTS | 2023年 / 13卷 / 01期
关键词
GENES; RNA; LUNG; EVI5;
D O I
10.1038/s41598-023-27435-4
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Idiopathic pulmonary hypertension (IPAH) is a condition that affects various tissues and organs and the metabolic and inflammatory systems. The most prevalent metabolic condition is metabolic syndrome (MS), which involves insulin resistance, dyslipidemia, and obesity. There may be a connection between IPAH and MS, based on a plethora of studies, although the underlying pathogenesis remains unclear. Through various bioinformatics analyses and machine learning algorithms, we identified 11 immune- and metabolism-related potential diagnostic genes (EVI5L, RNASE2, PARP10, TMEM131, TNFRSF1B, BSDC1, ACOT2, SAC3D1, SLA2, P4HB, and PHF1) for the diagnosis of IPAH and MS, and we herein supply a nomogram for the diagnosis of IPAH in MS patients. Additionally, we discovered IPAH's aberrant immune cells and discuss them here.
引用
收藏
页数:16
相关论文
共 50 条
  • [41] Identification and Validation of the Diagnostic Characteristic Genes of Ovarian Cancer by Bioinformatics and Machine Learning
    Liu, Jinya
    Liu, Leping
    Antwi, Paul Akwasi
    Luo, Yanwei
    Liang, Fang
    FRONTIERS IN GENETICS, 2022, 13
  • [42] NOVEL BIOMARKERS IN IDIOPATHIC PULMONARY ARTERIAL HYPERTENSION
    Rhodes, C. J.
    Wharton, J.
    Howard, L. S.
    Gibbs, J. S. R.
    Wilkins, M. R.
    THORAX, 2010, 65 : A44 - A44
  • [43] Identification of TXN and F5 as novel diagnostic gene biomarkers of the severe asthma based on bioinformatics and machine learning analysis
    Shou, Lu
    He, Haidong
    Wei, Yi
    Xu, Xianrong
    Wang, Wenmin
    Zheng, Jisheng
    AUTOIMMUNITY, 2024, 57 (01)
  • [44] Identification of Hub Genes and MicroRNAs Associated With Idiopathic Pulmonary Arterial Hypertension by Integrated Bioinformatics Analyses
    Qiu, Xue
    Lin, Jinyan
    Liang, Bixiao
    Chen, Yanbing
    Liu, Guoqun
    Zheng, Jing
    FRONTIERS IN GENETICS, 2021, 12
  • [45] Identification of Differentially Expressed Genes Associated with Idiopathic Pulmonary Arterial Hypertension by Integrated Bioinformatics Approaches
    Zhao, Enfa
    Xie, Hang
    Zhang, Yushun
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2021, 28 (01) : 79 - 88
  • [46] Identification of diagnostic biomarkers of rheumatoid arthritis based on machine learning-assisted comprehensive bioinformatics and its correlation with immune cells
    Mu, Kai-lang
    Ran, Fei
    Peng, Le-qiang
    Zhou, Ling-li
    Wu, Yu-tong
    Shao, Ming-hui
    Chen, Xiang-gui
    Guo, Chang-mao
    Luo, Qiu-mei
    Wang, Tian-jian
    Liu, Yu-chen
    Liu, Gang
    HELIYON, 2024, 10 (15)
  • [47] Identifying potential biomarkers of idiopathic pulmonary fibrosis through machine learning analysis
    Wu, Zenan
    Chen, Huan
    Ke, Shiwen
    Mo, Lisha
    Qiu, Mingliang
    Zhu, Guoshuang
    Zhu, Wei
    Liu, Liangji
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [48] Identifying potential biomarkers of idiopathic pulmonary fibrosis through machine learning analysis
    Zenan Wu
    Huan Chen
    Shiwen Ke
    Lisha Mo
    Mingliang Qiu
    Guoshuang Zhu
    Wei Zhu
    Liangji Liu
    Scientific Reports, 13
  • [49] Identification of potential biomarkers for lung cancer using integrated bioinformatics and machine learning approaches
    Rabby, Md Symun
    Islam, Md Merajul
    Kumar, Sujit
    Maniruzzaman, Md
    Hasan, Md Al Mehedi
    Tomioka, Yoichi
    Shin, Jungpil
    PLOS ONE, 2025, 20 (02):
  • [50] Identification of sepsis-associated encephalopathy biomarkers through machine learning and bioinformatics approaches
    Lei, Jingchao
    Zhai, Jia
    Qi, Jing
    Sun, Chuanzheng
    SCIENTIFIC REPORTS, 2024, 14 (01):