Biomedical Big Data Technologies, Applications, and Challenges for Precision Medicine: A Review

被引:5
|
作者
Yang, Xue [1 ,2 ]
Huang, Kexin [1 ,2 ]
Yang, Dewei [3 ]
Zhao, Weiling [4 ]
Zhou, Xiaobo [4 ]
机构
[1] Sichuan Univ, West China Hosp, Dept Pancreat Surg, Chengdu 610041, Peoples R China
[2] Sichuan Univ, West China Hosp, West China Biomed Big Data Ctr, Chengdu 610041, Peoples R China
[3] Chongqing Univ Posts & Telecommun, Coll Adv Mfg Engn, Chongqing 400000, Peoples R China
[4] UTHealth Houston, Ctr Syst Med, Sch Biomed Informat, Houston, TX 77030 USA
关键词
biomedical big data; electronic medical record; federated learning; knowledge graph; medical imaging analysis; omics data; precision medicine; ELECTRONIC HEALTH RECORDS; GENE-EXPRESSION; KNOWLEDGE GRAPH; ARTIFICIAL-INTELLIGENCE; CLINICAL-RESEARCH; COVID-19; VACCINE; CANCER; PREDICTION; SURGERY; NETWORK;
D O I
10.1002/gch2.202300163
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The explosive growth of biomedical Big Data presents both significant opportunities and challenges in the realm of knowledge discovery and translational applications within precision medicine. Efficient management, analysis, and interpretation of big data can pave the way for groundbreaking advancements in precision medicine. However, the unprecedented strides in the automated collection of large-scale molecular and clinical data have also introduced formidable challenges in terms of data analysis and interpretation, necessitating the development of novel computational approaches. Some potential challenges include the curse of dimensionality, data heterogeneity, missing data, class imbalance, and scalability issues. This overview article focuses on the recent progress and breakthroughs in the application of big data within precision medicine. Key aspects are summarized, including content, data sources, technologies, tools, challenges, and existing gaps. Nine fields-Datawarehouse and data management, electronic medical record, biomedical imaging informatics, Artificial intelligence-aided surgical design and surgery optimization, omics data, health monitoring data, knowledge graph, public health informatics, and security and privacy-are discussed. The explosive growth of biomedical Big Data presents both significant opportunities and challenges in the realm of knowledge discovery and translational applications within precision medicine. Efficient management, analysis, and interpretation of big data can pave the way for groundbreaking advancements in precision medicine. The review focuses on the recent progress and breakthroughs in the application of big data within precision medicine.image
引用
收藏
页数:21
相关论文
共 50 条
  • [31] Editorial: Big data technologies and applications
    Yulei Wu
    Yi Pan
    Payam Barnaghi
    Zhiyuan Tan
    Jingguo Ge
    Hao Wang
    [J]. Wireless Networks, 2022, 28 : 1163 - 1167
  • [33] Editorial: Big data technologies and applications
    Wu, Yulei
    Pan, Yi
    Barnaghi, Payam
    Tan, Zhiyuan
    Ge, Jingguo
    Wang, Hao
    [J]. WIRELESS NETWORKS, 2022, 28 (03) : 1163 - 1167
  • [34] Epidemiology in wonderland: Big Data and precision medicine
    Saracci, Rodolfo
    [J]. EUROPEAN JOURNAL OF EPIDEMIOLOGY, 2018, 33 (03) : 245 - 257
  • [35] The path from big data to precision medicine
    Huang, Bevan E.
    Mulyasasmita, Widya
    Rajagopal, Gunaretnam
    [J]. EXPERT REVIEW OF PRECISION MEDICINE AND DRUG DEVELOPMENT, 2016, 1 (02): : 129 - 143
  • [36] Generating Proteomic Big Data for Precision Medicine
    Yue, Liang
    Zhang, Fangfei
    Sun, Rui
    Sun, Yaoting
    Yuan, Chunhui
    Zhu, Yi
    Guo, Tiannan
    [J]. PROTEOMICS, 2020, 20 (21-22)
  • [38] Big data hurdles in precision medicine and precision public health
    Mattia Prosperi
    Jae S. Min
    Jiang Bian
    François Modave
    [J]. BMC Medical Informatics and Decision Making, 18
  • [40] Epidemiology in wonderland: Big Data and precision medicine
    Rodolfo Saracci
    [J]. European Journal of Epidemiology, 2018, 33 : 245 - 257