Advances in probing single biomolecules: From DNA bases to glycans

被引:5
|
作者
Hou, Baofei [1 ]
Zhang, Teng [1 ]
Yang, Huixia [1 ]
Han, Xu [1 ]
Liu, Liwei [1 ]
Li, Linfei [2 ]
Grazioli, Cesare [3 ]
Wu, Xu [1 ]
Jiang, Nan [2 ]
Wang, Yeliang [1 ]
机构
[1] Beijing Inst Technol, Sch Integrated Circuits & Elect, MIIT Key Lab Low Dimens Quantum Struct & Devices, Beijing, Peoples R China
[2] Univ Illinois, Dept Chem, Chicago, IL USA
[3] CNR, Ist Officina Mat, IOM, Trieste, Italy
来源
INTERDISCIPLINARY MATERIALS | 2023年 / 2卷 / 04期
基金
中国国家自然科学基金;
关键词
atomic-scale probing; biomolecules; scanning probe microscopy; structure; visualization; ATOMIC-FORCE MICROSCOPY; ION-BEAM DEPOSITION; MOLECULAR-STRUCTURE; CHIRAL RECOGNITION; AMINO-ACIDS; SURFACE; SOFT; TREHALOSE; GRAPHITE; INSIGHTS;
D O I
10.1002/idm2.12106
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Imaging biomolecules in real space is crucial for gaining a comprehensive understanding of the properties and functions of biological systems at the most fundamental level. Among the various imaging techniques available for biomolecules and their assembled nanostructures, scanning probe microscopy (SPM) provides a powerful and nondestructive imaging option. SPM is unique in visualizing intrinsically disordered biomolecules at the nanometer scale (e.g., glycans). This review highlights recent achievements in studying biomolecules using SPM technique, focusing on DNA bases, amino acids, proteins, and glycans. The atomic-level analysis of biomolecules made possible by SPM allows for a more accurate definition of the local structure-property relationship. High-resolution SPM imaging of single biomolecules offers a new way to study basic processes of life at the molecular level.
引用
收藏
页码:511 / 528
页数:18
相关论文
共 50 条
  • [31] From bits to bases: Computing with DNA
    Alan Dove
    Nature Biotechnology, 1998, 16 : 830 - 832
  • [32] From bits to bases: Computing with DNA
    Dove, A
    NATURE BIOTECHNOLOGY, 1998, 16 (09) : 830 - 832
  • [33] Probing protein-DNA interactions by unzipping a single DNA double helix
    Koch, SJ
    Shundrovsky, A
    Jantzen, BC
    Wang, MD
    BIOPHYSICAL JOURNAL, 2002, 83 (02) : 1098 - 1105
  • [34] Probing DNA single strands for single-base bulges with neocarzinostatin chromophore
    Kappen, LS
    Xi, Z
    Goldberg, IH
    BIOCHEMISTRY, 2001, 40 (50) : 15378 - 15383
  • [35] Optical methods for detection of single biomolecules: visualization, sensorics, sequencing of DNA molecules
    Melentiev, P. N.
    Kalmykov, A. S.
    Gritchenko, A. S.
    Shemeteva, M. P.
    Safonova, A. M.
    Markov, M. S.
    Balykin, V., I
    Bukatin, A. S.
    Vaulin, N. V.
    Belov, D. A.
    Evstrapov, A. A.
    Baklykov, D. A.
    Andriyash, A., V
    Barbasheva, A. A.
    Kuguk, A. K.
    Ryzhkov, V. V.
    Rodionov, I. A.
    Kudryavtsev, D. S.
    Mozhaeva, V. A.
    Son, L., V
    Tsetlin, V., I
    Khlebtsov, B. N.
    Kobzev, M. S.
    Kuznetsova, Yu O.
    Sharipov, B. T.
    Yashkin, A. S.
    Alekseev, Ya, I
    PHYSICS-USPEKHI, 2024, 67 (11) : 1069 - 1083
  • [36] Probing DNA and RNA single molecules with a double optical tweezer
    Mangeol, P.
    Cote, D.
    Bizebard, T.
    Legrand, O.
    Bockelmann, U.
    EUROPEAN PHYSICAL JOURNAL E, 2006, 19 (03): : 311 - 317
  • [37] Confinement Spectroscopy: Probing Single DNA Molecules with Tapered Nanochannels
    Persson, Fredrik
    Utko, Pawel
    Reisner, Walter
    Larsen, Niels B.
    Kristensen, Anders
    NANO LETTERS, 2009, 9 (04) : 1382 - 1385
  • [38] Probing DNA clamps with single-molecule force spectroscopy
    Wang, Lin
    Xu, Xiaojun
    Kumar, Ravindra
    Maiti, Buddhadev
    Liu, C. Tony
    Ivanov, Ivaylo
    Lee, Tae-Hee
    Benkovic, Stephen J.
    NUCLEIC ACIDS RESEARCH, 2013, 41 (16) : 7804 - 7814
  • [39] Probing protein - DNA interaction by single molecule and structural analysis
    Jin, J.
    Lian, T.
    Gu, C.
    Gao, Y.
    Sun, Y.
    Xie, X.
    Su, X.
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2014, 70 : C198 - C198
  • [40] Probing single DNA molecule transport using fabricated nanopores
    Chen, P
    Gu, JJ
    Brandin, E
    Kim, YR
    Wang, Q
    Branton, D
    NANO LETTERS, 2004, 4 (11) : 2293 - 2298