Single-Cell RNA-Sequencing in Astrocyte Development, Heterogeneity, and Disease

被引:4
|
作者
Gao, Meng-Yuan [1 ]
Wang, Jia-Qi [1 ]
He, Jin [1 ]
Gao, Rui [1 ]
Zhang, Yuan [1 ]
Li, Xing [1 ]
机构
[1] Shaanxi Normal Univ, Minist Educ, Coll Life Sci, Natl Engn Lab Resource Dev Endangered Crude Drugs, Xian 710119, Shaanxi, Peoples R China
关键词
Astrocyte; Heterogeneity; scRNA-seq; CNS diseases; REGIONAL DIFFERENCES; CNS SYNAPTOGENESIS; SECRETED PROTEINS; ROLES; EXPRESSION; FORM; GLIA; OLIGODENDROCYTES; TRANSCRIPTOME; REACTIVITY;
D O I
10.1007/s10571-023-01397-7
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Astrocytes are the most plentiful cell type in the central nervous system (CNS) and perform complicated functions in health and disease. It is obvious that different astrocyte subpopulations, or activation states, are relevant with specific genomic programs and functions. In recent years, the emergence of new technologies such as single-cell RNA sequencing (scRNA-seq) has made substantial advance in the characterization of astrocyte heterogeneity, astrocyte developmental trajectory, and its role in CNS diseases which has had a significant impact on neuroscience. In this review, we present an overview of astrocyte development, heterogeneity, and its essential role in the physiological and pathological environments of the CNS. We focused on the critical role of single-cell sequencing in revealing astrocyte development, heterogeneity, and its role in different CNS diseases.
引用
收藏
页码:3449 / 3464
页数:16
相关论文
共 50 条
  • [31] Heterogeneity of T Cells in Atherosclerosis Defined by Single-Cell RNA-Sequencing and Cytometry by Time of Flight
    Winkels, Holger
    Wolf, Dennis
    ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2021, 41 (02) : 549 - 563
  • [32] Surveying brain tumor heterogeneity by single-cell RNA-sequencing of multi-sector biopsies
    Yu, Kai
    Hu, Yuqiong
    Wu, Fan
    Guo, Qiufang
    Qian, Zenghui
    Hu, Waner
    Chen, Jing
    Wang, Kuanyu
    Fan, Xiaoying
    Wu, Xinglong
    Rasko, John E. J.
    Fan, Xiaolong
    Iavarone, Antonio
    Jiang, Tao
    Tang, Fuchou
    Su, Xiao-Dong
    NATIONAL SCIENCE REVIEW, 2020, 7 (08) : 1306 - 1318
  • [33] Surveying brain tumor heterogeneity by single-cell RNA-sequencing of multi-sector biopsies
    Kai Yu
    Yuqiong Hu
    Fan Wu
    Qiufang Guo
    Zenghui Qian
    Waner Hu
    Jing Chen
    Kuanyu Wang
    Xiaoying Fan
    Xinglong Wu
    John EJ Rasko
    Xiaolong Fan
    Antonio Iavarone
    Tao Jiang
    Fuchou Tang
    Xiao-Dong Su
    NationalScienceReview, 2020, 7 (08) : 1306 - 1318
  • [34] Intratumoral Cell Heterogeneity in Patient-Derived Glioblastoma Cell Lines Revealed by Single-Cell RNA-Sequencing
    Arbatskiy, Mikhail
    Balandin, Dmitriy
    Churov, Alexey
    Varachev, Vyacheslav
    Nikolaeva, Eugenia
    Mitrofanov, Alexei
    Bekyashev, Ali
    Tkacheva, Olga
    Susova, Olga
    Nasedkina, Tatiana
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (15)
  • [35] Single-cell RNA-sequencing of cellular heterogeneity and pathogenic mechanisms in paraquat-induced Parkinson's disease with depression
    Weng, Yali
    Zhang, Yu
    Li, Yinhan
    Lin, Xinpei
    Guo, Zhenkun
    Hu, Hong
    Shao, Wenya
    Yu, Guangxia
    Zheng, Fuli
    Cai, Ping
    Li, Huangyuan
    Wu, Siying
    ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2024, 273
  • [36] Significance analysis for clustering with single-cell RNA-sequencing data
    Grabski, Isabella N.
    Street, Kelly
    Irizarry, Rafael A.
    NATURE METHODS, 2023, 20 (08) : 1196 - +
  • [37] A systematic evaluation of single-cell RNA-sequencing imputation methods
    Hou, Wenpin
    Ji, Zhicheng
    Ji, Hongkai
    Hicks, Stephanie C.
    GENOME BIOLOGY, 2020, 21 (01)
  • [38] A systematic evaluation of single-cell RNA-sequencing imputation methods
    Wenpin Hou
    Zhicheng Ji
    Hongkai Ji
    Stephanie C. Hicks
    Genome Biology, 21
  • [39] Significance analysis for clustering with single-cell RNA-sequencing data
    Isabella N. Grabski
    Kelly Street
    Rafael A. Irizarry
    Nature Methods, 2023, 20 : 1196 - 1202
  • [40] Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
    Mereu, Elisabetta
    Lafzi, Atefeh
    Moutinho, Catia
    Ziegenhain, Christoph
    McCarthy, Davis J.
    Alvarez-Varela, Adrian
    Batlle, Eduard
    Sagar
    Gruen, Dominic
    Lau, Julia K.
    Boutet, Stephane C.
    Sanada, Chad
    Ooi, Aik
    Jones, Robert C.
    Kaihara, Kelly
    Brampton, Chris
    Talaga, Yasha
    Sasagawa, Yohei
    Tanaka, Kaori
    Hayashi, Tetsutaro
    Braeuning, Caroline
    Fischer, Cornelius
    Sauers, Sascha
    Trefzer, Timo
    Conrad, Christian
    Adiconis, Xian
    Nguyen, Lan T.
    Regev, Aviv
    Levin, Joshua Z.
    Parekh, Swati
    Janjic, Aleksandar
    Wange, Lucas E.
    Bagnoli, Johannes W.
    Enard, Wolfgang
    Gut, Marta
    Sandberg, Rickard
    Nikaido, Itoshi
    Gut, Ivo
    Stegle, Oliver
    Heyn, Holger
    NATURE BIOTECHNOLOGY, 2020, 38 (06) : 747 - +