Halogen Bonding in Brominated BODIPY Crystals: a Crystallographic and Computational Study

被引:2
|
作者
Farfan-Paredes, Monica [1 ]
Labra-Vazquez, Pablo [2 ]
Gonzalez-Antonio, Oscar [3 ]
Martinez-Bourget, Diego [3 ]
Guzman-Cedillo, Cristian [3 ]
Galindo-Hernandez, Aylin [3 ]
Romero, Margarita [3 ]
Santillan, Rosa [1 ]
Farfan, Norberto [3 ]
机构
[1] IPN, Ctr Invest & Estudios Avanzados, Dept Quim, Ave Inst Politec Nacl 2508, Ciudad De Mexico 07360, DF, Mexico
[2] Univ Toulouse 3 Paul Sabatier, Univ Toulouse, CIRIMAT, CNRS, 118 Route Narbonne, F-31062 Toulouse 9, France
[3] Univ Nacl Autonoma Mexico, Fac Quim, Dept Quim Organ, Ciudad De Mexico 04510, Mexico
关键词
BODIPYs; crystal engineering; halogen bonding; sigma holes; X-RAY-DIFFRACTION; HYDROGEN-BONDS;
D O I
10.1002/chem.202302847
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The study of halogen bonds (XBs) has been a subject of great interest in recent years due to its clear application in catalysis, liquid crystals, and crystal engineering. In this study, we analyzed the intermolecular interactions, in particular halogen bonds in BODIPYs with an increasing number of bromine atoms. The computational study included analyses through three different methods: the first approach of close contacts provided by mercury, then the expanded approach of the electron density partition of the molecules in the crystals provided by the analysis of Hirshfeld surfaces, and finally, the approach of the Quantum Theory of Atoms in Molecules (QT-AIM) to characterize the non-covalent interactions through finding electron density critical points between atoms and between neighboring molecules. The use of different computational methods allowed to gain insight into the interactions directing the crystal packing as the number of bromine atoms increased in the BODIPY moiety. Monocoordinated and bifurcated halogen bonds involving halide/halide were found. The penta-brominated BODIPY showed four-center cyclic nodes where each node is linked via XBs. This kind of motif can be useful in supramolecular chemistry and self-assembly.
引用
收藏
页数:8
相关论文
共 50 条
  • [21] Thermomechanical effect of molecular crystals and role of halogen bonding
    Mittapalli, Sudhir
    Perumalla, D. Sravanakumar
    Nangia, Ashwini
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2017, 73 : C707 - C707
  • [22] Computational study of the substituent effect of halogenated fused-ring heteroaromatics on halogen bonding
    Zhang, Qihua
    Smalley, Adam
    Zhu, Zhengdan
    Xu, Zhijian
    Peng, Cheng
    Chen, Zhaoqiang
    Yao, Guangmin
    Shi, Jiye
    Zhu, Weiliang
    JOURNAL OF MOLECULAR MODELING, 2020, 26 (10)
  • [23] Computational study of the substituent effect of halogenated fused-ring heteroaromatics on halogen bonding
    Qihua Zhang
    Adam Smalley
    Zhengdan Zhu
    Zhijian Xu
    Cheng Peng
    Zhaoqiang Chen
    Guangmin Yao
    Jiye Shi
    Weiliang Zhu
    Journal of Molecular Modeling, 2020, 26
  • [24] Halogen bonding in drug-like molecules: a computational and systematic study of the substituent effect
    Adasme-Carreno, Francisco
    Munoz-Gutierrez, Camila
    Alzate-Morales, Jans H.
    RSC ADVANCES, 2016, 6 (66) : 61837 - 61847
  • [25] Halogen bonding in biological context: a computational study of D2 dopamine receptor
    Luchi, Adriano M.
    Angelina, Emilio L.
    Andujar, Sebastian A.
    Enriz, Ricardo D.
    Peruchena, Nelida M.
    JOURNAL OF PHYSICAL ORGANIC CHEMISTRY, 2016, 29 (11) : 645 - 655
  • [26] Halogen Interactions in Halogenated Oxindoles: Crystallographic and Computational Investigations of Intermolecular Interactions
    Silva, Rodrigo A. Lemos
    da Silva Filho, Demetrio A.
    Moberg, Megan E.
    Pappenfus, Ted M.
    Janzen, Daron E.
    MOLECULES, 2021, 26 (18):
  • [27] Halogen Bonding Propensity in Solution: Direct Observation and Computational Prediction
    Bramlett, Taylor A.
    Matzger, Adam J.
    CHEMISTRY-A EUROPEAN JOURNAL, 2021, 27 (62) : 15472 - 15478
  • [28] Probing hydrogen and halogen-oxo interactions in uranyl coordination polymers: a combined crystallographic and computational study
    Carter, Korey P.
    Kalaj, Mark
    Kerridge, Andrew
    Cahill, Christopher L.
    CRYSTENGCOMM, 2018, 20 (34): : 4916 - 4925
  • [29] Comparing Strong and Weak Halogen Bonding in Solution: 13C NMR, UV/Vis, Crystallographic, and Computational Studies of an Intramolecular Model
    Widner, Danielle L.
    Robinson, Emily R.
    Perez, Alejandra B.
    Vang, Herh G.
    Thorson, Rachel A.
    Driscoll, Zakarias L.
    Giebel, Sierra M.
    Berndt, Calvin W.
    Bosch, Eric
    Speetzen, Erin D.
    Bowling, Nathan P.
    EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 2017, 2017 (38) : 5739 - 5749
  • [30] A Combined Experimental and Computational Study of Halogen and Hydrogen Bonding in Molecular Salts of 5-Bromocytosine
    Aschi, Massimiliano
    Brocchi, Giorgia Toto
    Portalone, Gustavo
    MOLECULES, 2021, 26 (11):