Chitin and Chitosan Binding to the α-Chitin Crystal: A Molecular Dynamics Study

被引:5
|
作者
Hudek, Magdalena [2 ]
Kubiak-Ossowska, Karina [1 ]
Johnston, Karen [2 ]
Ferro, Valerie A. [3 ]
Mulheran, Paul A. [2 ]
机构
[1] Univ Strathclyde, Dept Phys, ARCHIE WeSt, Glasgow G4 0NG, Lanark, Scotland
[2] Univ Strathclyde, Dept Chem & Proc Engn, Glasgow G1 1XJ, Lanark, Scotland
[3] Univ Strathclyde, Strathclyde Inst Pharm & Biomed Sci, Glasgow G4 0RE, Lanark, Scotland
来源
ACS OMEGA | 2023年 / 8卷 / 03期
基金
英国生物技术与生命科学研究理事会;
关键词
D O I
10.1021/acsomega.2c07495
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Understanding the binding of chitosan oligomers to the surface of a chitin nanocrystal is important for improving the enzymatic deacetylation of chitin and for the design of chitin/chitosan composite films. Here, we study the binding of several chito-oligomers to the (100) surface of an alpha-chitin crystal using molecular dynamics (MD), steered MD, and umbrella sampling. The convergence of the free energy was carefully considered and yielded a binding energies of -12.5 and -2 kcal mol(-1) for 6-monomer-long chitin and uncharged chitosan oligomers, respectively. We also found that the results for the umbrella sampling were consistent with the force profile from the steered MD and with classical MD simulations of the adsorption process. Our results give insight into the molecular-scale interactions, which can be helpful for the design of new chitin composite films. Furthermore, the free energy curves we present can be used to validate coarse-grained models for chitin and chitosan, which are necessary to study the self-assembly of chitin crystals due to the long time scale of the process.
引用
收藏
页码:3470 / 3477
页数:8
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