TMUB1 expression is associated with the prognosis of colon cancer and immune cell infiltration

被引:2
|
作者
Lu, Yan [1 ,2 ]
Wang, Kang [3 ,4 ]
Peng, Yuanhong [3 ,4 ]
Zhang, Jun [3 ,4 ]
Ju, Qinuo [5 ]
Xu, Qihuan [3 ,4 ]
Ouyang, Manzhao [3 ,4 ]
He, Zhiwei [1 ]
机构
[1] Guangdong Med Univ, Dongguan, Guangdong, Peoples R China
[2] Southern Med Univ, Shunde Hosp, Peoples Hosp Shunde Foshan 1, GCP Ctr, Foshan, Guangdong, Peoples R China
[3] Southern Med Univ, Shunde Hosp, Peoples Hosp Shunde Foshan 1, Dept Gastrointestinal Surg, Foshan, Guangdong, Peoples R China
[4] Southern Med Univ, Sch Clin Med 2, Guangzhou, Guangdong, Peoples R China
[5] Guangdong Country Garden Sch, Foshan, Guangdong, Peoples R China
来源
PEERJ | 2023年 / 11卷
关键词
TMUB1; Bioinformatics analysis; Colon cancer; Immune cell infiltration; Clinic prognosis; RESPONSES; SURVIVAL;
D O I
10.7717/peerj.16334
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background. TMUB1 is a transmembrane protein involved in biological signaling and plays an important role in the stability and transcription of P53. However, its role in tumor remains unknown.Methods. Using R language, the expression level of 33 cancer spectrum TMUB1 was analyzed by the public database TCGA, GEO and HPA, the differential expressed gene (DEG) screening and protein interaction (PPI) network was constructed, and the differential genes of TMUB1 in colon cancer were identified. The relevant signaling pathways were identified by gene functional annotation and enrichment analysis. The ssGSEA algorithm in GSVA were used for immune infiltration analysis. The Kaplan -Meier analysis, univariate and multivariate Cox regression analysis, nomogram and calibration map analysis were constructed to evaluate the correlation between TMUB1 expression and clinical prognosis. The expression levels of TMUB1 in intestinal cancer cell lines as well as in 10 intestinal cancer tissues were verified by qPCR experiments.Results. Through the bioinformatics analysis of multiple databases and preliminary experimental studies, we found that the expression of TMUB1 was significantly increased in colon cancer tumors, and was correlated with the clinical N stage, pathological grade, lymphatic metastasis and BMI of colon cancer. TMUB1 may be involved in the regulation of the malignant progression of colon cancer. Meanwhile, patients with high expression of TMUB1 mRNA had worse OS and DSS, and TMUB1 expression was an independent prognostic factor for OS and DSS. It was further found that highly expressed TMUB1 tissues showed low levels of immune infiltration and stromal infiltration.Conclusion. We reported the expression level of TMUB1 in colon cancer and analyzed its potential prognostic value in colon cancer through the bioinformatics analysis and preliminary experimental studies. The high expression of TMUB1 is a negative prognostic factor for colon cancer patients. TMUB1 may be a potential target for colon cancer.
引用
收藏
页数:21
相关论文
共 50 条
  • [41] CPXM1 correlates to poor prognosis and immune cell infiltration in gastric cancer
    Gu, Qiou
    Mi, Lei
    Lai, Chuilin
    Guan, Xiao
    Lu, Na
    Zhan, Tian
    Wang, Guoguang
    Lu, Chen
    Xu, Lei
    Gao, Xiang
    Zhang, Jianping
    HELIYON, 2024, 10 (03)
  • [42] Decreased expression of JAK1 associated with immune infiltration and poor prognosis in lung adenocarcinoma
    Cai, Jinlian
    Deng, Hong
    Luo, Linlin
    You, Luxia
    Liao, Huitian
    Zheng, Yan
    AGING-US, 2021, 13 (02): : 2073 - 2088
  • [43] INSC Is a Prognosis-Associated Biomarker Involved in Tumor Immune Infiltration in Colon Adenocarcinoma
    Su, Zhaoran
    Jia, Weidong
    BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [44] Elevated expression of SRRM3 predicts poor prognosis and is associated with immune infiltration in bladder cancer
    Chi, Junpeng
    Jiang, Xudong
    Liu, Qingzuo
    Cui, Yuanshan
    ASIAN JOURNAL OF SURGERY, 2024, 47 (08) : 3553 - 3554
  • [45] Decreased expression of TXNIP is associated with poor prognosis and immune infiltration in kidney renal clear cell carcinoma
    Liu, Wanlu
    Xiao, Zhen
    Dong, Mingyou
    Li, Xiaolei
    Huang, Zhongshi
    ONCOLOGY LETTERS, 2024, 27 (03)
  • [46] Increased Expression of PDGFA Is Associated With Poor Prognosis and Immune Infiltration in Head and Neck Squamous Cell Carcinoma
    Wang, Kaiqin
    Li, Changya
    Chen, Huarong
    Gu, Ping
    Lu, Jiafeng
    Zhao, Houyu
    Zhuo, Xianlu
    JOURNAL OF ORAL PATHOLOGY & MEDICINE, 2024, 53 (09) : 584 - 594
  • [47] Effect of activating cancer-associated fibroblasts biomarker TNC on immune cell infiltration and prognosis in breast cancer
    Huang, Ting
    Lu, Cheng
    Zhang, Ying
    Lin, Bi-yun
    Zhang, Zhe-jun
    Zhu, Di
    Wang, Liang
    Lu, Yuanzhi
    ANNALS OF MEDICINE, 2023, 55 (02)
  • [48] Effect of Activating Cancer-associated Fibroblasts Biomarker TNC on Immune Cell Infiltration and Prognosis in Breast Cancer
    Huang, Ting
    Zhu, Di
    Lu, Yuanzhi
    LABORATORY INVESTIGATION, 2023, 103 (03) : S147 - S148
  • [49] Identification of Key lncRNAs Associated with Immune Infiltration and Prognosis in Gastric Cancer
    Jin, Wen
    Jia, Jianchao
    Si, Yangming
    Liu, Jianli
    Li, Hanshuang
    Zhu, Hao
    Wu, Zhouying
    Zuo, Yongchun
    Yu, Lan
    BIOCHEMICAL GENETICS, 2024,
  • [50] A pyroptosis-related gene signature that predicts immune infiltration and prognosis in colon cancer
    Wu, Mingjian
    Hao, Shuai
    Wang, Xiaoxiang
    Su, Shuguang
    Du, Siyuan
    Zhou, Sitong
    Yang, Ronghua
    Du, Hanpeng
    FRONTIERS IN ONCOLOGY, 2023, 13