Immune infiltration is associated with pan-cancer prognostic biomarker RING finger protein 187

被引:0
|
作者
Fan, Xin-Tong [1 ]
Gao, Bing-Fang [1 ]
Wang, Xiao-Fei [1 ]
Zhou, Kai [1 ]
Zhao, Ying [1 ]
Yuan, Jie [1 ]
机构
[1] TCM Integrated Hosp Zibo, Zibo, Peoples R China
关键词
bioinformatics; immune infiltration; immunohistochemistry; pan-cancer; RING finger protein 187; UBIQUITIN LIGASES; COACTIVATOR; RNF187;
D O I
10.1002/jmr.3071
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cancer is associated with the highest mortality rate globally. While life-saving screening and treatments exist, better awareness is needed. RNF187, an E3 ligase regulating biological processes, belongs to the RING domain-containing E3 ligase family. RNF187 may serve as an oncogene due to abnormal expression in tumors. However, its association with immune infiltration and prognosis across various cancers remains unclear. We searched several databases including TCGA, GTE x, CCLE, TIMER, and GSEA. R software was used to evaluate RNF187 differential expression, survival, pathology stage, DNA methylation, tumor mutational burden (TMB), microsatellite instability (MSI), gene co-expression analysis, mismatch repairs (MMRs), tumor microenvironment (TME), and immune cell infiltration. Clinicopathological data were collected, and immunohistochemistry was used to verify RNF187 expression in tumor tissues. RNF187 expression was up-regulated in various cancers compared to that in normal tissues and associated with poor patient outcomes. Dysregulation of RNF187 expression in multiple cancer types was strongly correlated with DNA methylation, MMR, MSI, and TMB. RNF187 could interact with different immune cells in cancers. Biomarkers associated with RNF187 may be helpful for prognosis and immunology in treating pan-cancer patients.
引用
收藏
页数:31
相关论文
共 50 条
  • [21] C1QTNF6 is a Prognostic Biomarker and Related to Immune Infiltration and Drug Sensitivity: A Pan-Cancer Analysis
    Liu, Wei
    Zhang, Jian
    Xie, Tao
    Huang, Xiaoting
    Wang, Baiyao
    Tian, Yunhong
    Yuan, Yawei
    FRONTIERS IN PHARMACOLOGY, 2022, 13
  • [22] Pan-cancer analysis and experimental validation of FPR3 as a prognostic and immune infiltration-related biomarker for glioma
    Ye, Chenglin
    Li, Peng
    Chen, Boxu
    Mo, Yong
    Huang, Qianrong
    Li, Qiuyun
    Hou, Qinhan
    Mo, Ligen
    Yan, Jun
    FRONTIERS IN GENETICS, 2024, 15
  • [23] Comprehensive analysis of zinc and ring finger 3 in prognostic value and pan-cancer immunity
    Liu, Minghui
    Zhao, Huan
    Peng, Suming
    Wu, Yunfei
    Liu, Yanyan
    Sun, Wu
    Zen, Ke
    Sun, Xinlei
    FASEB JOURNAL, 2024, 38 (05):
  • [24] CSE1L as a prognostic biomarker associated with pan cancer immune infiltration and drug sensitivity
    Li, Haiyang
    Wang, Lingwa
    Ruan, Zhaohui
    Li, Xiaoyan
    Yang, Yifan
    Fang, Jugao
    Wang, Ru
    EXPERT REVIEW OF CLINICAL IMMUNOLOGY, 2024, 20 (09) : 1113 - 1125
  • [25] A Pan-cancer Analysis to Determine the Prognostic Analysis and Immune Infiltration of HSPA5
    Zhu, Rong-Kun
    Zhang, Wei
    Zhang, Yi-Xing
    Hui, Zeng
    Wang, Xiong-Wei
    CURRENT CANCER DRUG TARGETS, 2024, 24 (01) : 14 - 27
  • [26] Cancer-testis antigen CEP55 serves as a prognostic biomarker and is correlated with immune infiltration and immunotherapy efficacy in pan-cancer
    Xie, Xiaodong
    Liang, Hongyin
    Jiangting, Wushuang
    Wang, Yu
    Ma, Xiao
    Tan, Zhen
    Cheng, Long
    Luo, Zhulin
    Wang, Tao
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 10
  • [27] Retinol-Binding Protein 4 as a Biomarker in Cancer: Insights from a Pan-Cancer Analysis of Expression, Immune Infiltration, and Methylation
    Zhao, Jia
    Liu, Yaxin
    Zhou, Lingqin
    Liu, Yi
    GENES, 2025, 16 (02)
  • [28] Pan-cancer analysis of PSCA that is associated with immune infiltration and affects patient prognosis
    Wang, Chenxing
    Zhu, Xingjia
    Zheng, Ming
    Chen, Yixun
    Jiang, Rui
    He, Xinyi
    Liu, Zongheng
    Lu, Zhichao
    Wang, Ziheng
    Yang, Yang
    PLOS ONE, 2024, 19 (06):
  • [29] A pan-cancer analysis of thioredoxin-interacting protein as an immunological and prognostic biomarker
    Guo, Xuxue
    Huang, Mei
    Zhang, Haonan
    Chen, Qianhui
    Hu, Ying
    Meng, Yan
    Wu, Changjie
    Tu, Chenge
    Liu, Yongfeng
    Li, Aimin
    Li, Qingyuan
    Zhou, Peirong
    Liu, Side
    CANCER CELL INTERNATIONAL, 2022, 22 (01)
  • [30] A pan-cancer analysis of thioredoxin-interacting protein as an immunological and prognostic biomarker
    Xuxue Guo
    Mei Huang
    Haonan Zhang
    Qianhui Chen
    Ying Hu
    Yan Meng
    Changjie Wu
    Chenge Tu
    Yongfeng Liu
    Aimin Li
    Qingyuan Li
    Peirong Zhou
    Side Liu
    Cancer Cell International, 22