Bioinformatics analysis and identification of hub genes associated with female acute myocardial infarction patients by using weighted gene co-expression networks

被引:1
|
作者
Jiao, Kun [1 ]
Su, Ping [1 ]
Feng, Yubao [1 ]
Li, Changqing [1 ,2 ]
机构
[1] Ordos Cent Hosp, Cardiol Dept, Ordos, Peoples R China
[2] Ordos Cent Hosp, Cardiol Dept, Ordos 017000, Peoples R China
关键词
acute myocardial infarction; differentially expressed genes; female; IL-17 signaling pathway; inflammatory factors; S100; PROTEINS;
D O I
10.1097/MD.0000000000033634
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
To explore potential biomarkers of acute myocardial infarction (AMI) in females by using bioinformatics analysis. In this study, we explored potential biomarkers of AMI in females using bioinformatics analysis. We screened a total of 186 differentially expressed genes from the Gene Expression Omnibus. In the study, we found that weighted gene co-expression network analysis explored the co-expression network of genes and identified key modules. Simultaneously, we chose brown modules as key modules related to AMI. In this study, Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis revealed that genes in the brown module were mainly enriched in "heparin" and 'complementation and coagulation cascade. Based on the protein-protein interaction network, we identified S100A9, mitogen-activated protein kinase (MAPK) 3, MAPK1, MMP3, interleukin (IL)-17A, and HSP90AB1 as hub gene sets. Whereas, polymerase chain reaction results showed that S100A9, MAPK3, MAPK1, MMP3, IL-17A, and HSP90AB1 were highly expressed compared with the control group. The IL-17 signaling pathway associated with an inflammatory response may be a potential biomarker and target for the treatment of women with myocardial infarction.
引用
收藏
页数:10
相关论文
共 50 条
  • [41] Weighted Gene Co-Expression Network Analysis Identifies Critical Genes in the Development of Heart Failure After Acute Myocardial Infarction
    Niu, Xiaowei
    Zhang, Jingjing
    Zhang, Lanlan
    Hou, Yangfan
    Pu, Shuangshuang
    Chu, Aiai
    Bai, Ming
    Zhang, Zheng
    FRONTIERS IN GENETICS, 2019, 10
  • [42] Weighted gene co-expression network analysis identifies key hub genes and pathways in acute myeloid leukemia
    Wang, Xinfeng
    Bajpai, Akhilesh K.
    Gu, Qingqing
    Ashbrook, David G.
    Starlard-Davenport, Athena
    Lu, Lu
    FRONTIERS IN GENETICS, 2023, 14
  • [43] Weighted gene co-expression network analysis to identify key modules and hub genes associated with paucigranulocytic asthma
    Li, Min
    Zhu, Wenye
    Wang, Chu
    Zheng, Yuanyuan
    Sun, Shibo
    Fang, Yan
    Luo, Zhuang
    BMC PULMONARY MEDICINE, 2021, 21 (01)
  • [44] Identification of key genes associated with the progression of intrahepatic cholangiocarcinoma using weighted gene co-expression network analysis
    Ye, Zi
    Zeng, Zhirui
    Wang, Da
    Lei, Shan
    Shen, Yiyi
    Chen, Zubing
    ONCOLOGY LETTERS, 2020, 20 (01) : 483 - 494
  • [45] Weighted gene co-expression network analysis to identify key modules and hub genes associated with atrial fibrillation
    Li, Wenyuan
    Wang, Lijun
    Wu, Yue
    Yuan, Zuyi
    Zhou, Juan
    INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE, 2020, 45 (02) : 401 - 416
  • [46] Weighted gene co-expression network analysis reveals modules and hub genes associated with the development of breast cancer
    Qiu, Juanjuan
    Du, Zhenggui
    Wang, Yao
    Zhou, Yuting
    Zhang, Yuanxin
    Xie, Yanyan
    Lv, Qing
    MEDICINE, 2019, 98 (06)
  • [47] Weighted gene co-expression network analysis identified six hub genes associated with rupture of intracranial aneurysms
    Wang, Qunhui
    Luo, Qi
    Yang, Zhongxi
    Zhao, Yu-Hao
    Li, Jiaqi
    Wang, Jian
    Piao, Jianmin
    Chen, Xuan
    PLOS ONE, 2020, 15 (02):
  • [48] Weighted gene co-expression network analysis to identify key modules and hub genes associated with paucigranulocytic asthma
    Min Li
    Wenye Zhu
    Chu Wang
    Yuanyuan Zheng
    Shibo Sun
    Yan Fang
    Zhuang Luo
    BMC Pulmonary Medicine, 21
  • [49] Identification of Key Genes and Pathways associated with Endometriosis by Weighted Gene Co-expression Network Analysis
    Wu, Jingni
    Fang, Xiaoling
    Xia, Xiaomeng
    INTERNATIONAL JOURNAL OF MEDICAL SCIENCES, 2021, 18 (15): : 3425 - 3436
  • [50] Identification of genes associated with abiotic stress tolerance in sweetpotato using weighted gene co-expression network analysis
    Kitavi, Mercy
    Gemenet, Dorcus C.
    Wood, Joshua C.
    Hamilton, John P.
    Wu, Shan
    Fei, Zhangjun
    Khan, Awais
    Buell, C. Robin
    PLANT DIRECT, 2023, 7 (10)