Machine-Learning-Based Radiomics for Classifying Glioma Grade from Magnetic Resonance Images of the Brain

被引:6
|
作者
Kumar, Anuj [1 ]
Jha, Ashish Kumar [2 ]
Agarwal, Jai Prakash [1 ]
Yadav, Manender [1 ]
Badhe, Suvarna [1 ]
Sahay, Ayushi [3 ]
Epari, Sridhar [3 ]
Sahu, Arpita [4 ]
Bhattacharya, Kajari [4 ]
Chatterjee, Abhishek [1 ]
Ganeshan, Balaji [5 ]
Rangarajan, Venkatesh [2 ]
Moyiadi, Aliasgar [6 ]
Gupta, Tejpal [1 ]
Goda, Jayant S. [1 ]
机构
[1] Homi Bhaba Natl Inst, Tata Mem Ctr, Dept Radiat Oncol, Mumbai 400012, India
[2] Homi Bhaba Natl Inst, Tata Mem Ctr, Dept Nucl Med, Mumbai 400012, India
[3] Homi Bhaba Natl Inst, Tata Mem Ctr, Dept Pathol, Mumbai 400012, India
[4] Homi Bhaba Natl Inst, Tata Mem Ctr, Dept Radiodiag, Mumbai 400012, India
[5] Univ Coll London Hosp, Inst Nucl Med, 235 Euston Rd, London NW1 2BU, England
[6] Homi Bhaba Natl Inst, Tata Mem Ctr, Dept Neurosurg, Mumbai 400012, India
来源
JOURNAL OF PERSONALIZED MEDICINE | 2023年 / 13卷 / 06期
关键词
glioma grade; radiomics; machine learning; classifiers; CT TEXTURE ANALYSIS; CANCER HETEROGENEITY; TUMOR HETEROGENEITY; MALIGNANT GLIOMA; PERFUSION; CLASSIFICATION; CHEMOTHERAPY; BIOMARKER; PREDICT; TOOL;
D O I
10.3390/jpm13060920
中图分类号
R19 [保健组织与事业(卫生事业管理)];
学科分类号
摘要
Grading of gliomas is a piece of critical information related to prognosis and survival. Classifying glioma grade by semantic radiological features is subjective, requires multiple MRI sequences, is quite complex and clinically demanding, and can very often result in erroneous radiological diagnosis. We used a radiomics approach with machine learning classifiers to determine the grade of gliomas. Eighty-three patients with histopathologically proven gliomas underwent MRI of the brain. Whenever available, immunohistochemistry was additionally used to augment the histopathological diagnosis. Segmentation was performed manually on the T2W MR sequence using the TexRad texture analysis softwareTM, Version 3.10. Forty-two radiomics features, which included first-order features and shape features, were derived and compared between high-grade and low-grade gliomas. Features were selected by recursive feature elimination using a random forest algorithm method. The classification performance of the models was measured using accuracy, precision, recall, f1 score, and area under the curve (AUC) of the receiver operating characteristic curve. A 10-fold cross-validation was adopted to separate the training and the test data. The selected features were used to build five classifier models: support vector machine, random forest, gradient boost, naive Bayes, and AdaBoost classifiers. The random forest model performed the best, achieving an AUC of 0.81, an accuracy of 0.83, f1 score of 0.88, a recall of 0.93, and a precision of 0.85 for the test cohort. The results suggest that machine-learning-based radiomics features extracted from multiparametric MRI images can provide a non-invasive method for predicting glioma grades preoperatively. In the present study, we extracted the radiomics features from a single cross-sectional image of the T2W MRI sequence and utilized these features to build a fairly robust model to classify low-grade gliomas from high-grade gliomas (grade 4 gliomas).
引用
收藏
页数:17
相关论文
共 50 条
  • [21] Machine Learning Approach for Classifying the Cognitive States of the Human Brain with Functional Magnetic Resonance Imaging (fMRI)
    Ahmad, Rana Fayyaz
    Malik, Aamir Saeed
    Kamel, Nidal
    Reza, Faruque
    [J]. 2016 6TH INTERNATIONAL CONFERENCE ON INTELLIGENT AND ADVANCED SYSTEMS (ICIAS), 2016,
  • [22] Cystic renal mass screening: machine-learning-based radiomics on unenhanced computed tomography
    Huang, Lesheng
    Ye, Yongsong
    Chen, Jun
    Feng, Wenhui
    Peng, Se
    Du, Xiaohua
    Li, Xiaodan
    Song, Zhixuan
    Liu, Tianzhu
    [J]. DIAGNOSTIC AND INTERVENTIONAL RADIOLOGY, 2024, 30 (04): : 236 - 247
  • [23] Brain simulation augments machine-learning-based classification of dementia
    Triebkorn, Paul
    Stefanovski, Leon
    Dhindsa, Kiret
    Diaz-cortes, Margarita-Arimatea
    Bey, Patrik
    Bulau, Konstantin
    Pai, Roopa
    Spiegler, Andreas
    Solodkin, Ana
    Jirsa, Viktor
    McIntosh, Anthony Randal
    Ritter, Petra
    [J]. ALZHEIMERS & DEMENTIA-TRANSLATIONAL RESEARCH & CLINICAL INTERVENTIONS, 2022, 8 (01)
  • [24] Automatic classification of brain magnetic resonance images with hypercolumn deep features and machine learning
    Kemal Akyol
    [J]. Physical and Engineering Sciences in Medicine, 2022, 45 : 935 - 947
  • [25] Objective risk stratification of prostate cancer using machine learning and radiomics applied to multiparametric magnetic resonance images
    Varghese, Bino
    Chen, Frank
    Hwang, Darryl
    Palmer, Suzanne L.
    Abreu, Andre Luis De Castro
    Ukimura, Osamu
    Aron, Monish
    Aron, Manju
    Gill, Inderbir
    Duddalwar, Vinay
    Pandey, Gaurav
    [J]. SCIENTIFIC REPORTS, 2019, 9 (1)
  • [26] Objective risk stratification of prostate cancer using machine learning and radiomics applied to multiparametric magnetic resonance images
    Bino Varghese
    Frank Chen
    Darryl Hwang
    Suzanne L Palmer
    Andre Luis De Castro Abreu
    Osamu Ukimura
    Monish Aron
    Manju Aron
    Inderbir Gill
    Vinay Duddalwar
    Gaurav Pandey
    [J]. Scientific Reports, 9
  • [27] Automatic classification of brain magnetic resonance images with hypercolumn deep features and machine learning
    Akyol, Kemal
    [J]. PHYSICAL AND ENGINEERING SCIENCES IN MEDICINE, 2022, 45 (3) : 935 - 947
  • [28] Deep Learning Radiomics to Predict PTEN Mutation Status From Magnetic Resonance Imaging in Patients With Glioma
    Chen, Hongyu
    Lin, Fuhua
    Zhang, Jinming
    Lv, Xiaofei
    Zhou, Jian
    Li, Zhi-Cheng
    Chen, Yinsheng
    [J]. FRONTIERS IN ONCOLOGY, 2021, 11
  • [29] Machine Learning-Based Radiomics Nomogram Using Magnetic Resonance Images for Prediction of Neoadjuvant Chemotherapy Efficacy in Breast Cancer Patients
    Chen, Shujun
    Shu, Zhenyu
    Li, Yongfeng
    Chen, Bo
    Tang, Lirong
    Mo, Wenju
    Shao, Guoliang
    Shao, Feng
    [J]. FRONTIERS IN ONCOLOGY, 2020, 10
  • [30] Machine-Learning-Based Throughput Estimation Using Images for mmWave Communications
    Okamoto, Hironao
    Nishio, Takayuki
    Morikura, Masahiro
    Yamamoto, Koji
    Murayama, Daisuke
    Nakahira, Katsuya
    [J]. 2017 IEEE 85TH VEHICULAR TECHNOLOGY CONFERENCE (VTC SPRING), 2017,