Complete genome sequence of a new putative member of the genus Pelarspovirus that infects Quercus aliena Blume in South Korea

被引:0
|
作者
Kwon, Jeong A. [1 ,2 ]
Kim, Se Eun [1 ]
Igori, Davaajargal [1 ,3 ]
Ahn, Jun Ki [4 ]
Seo, Han Kyu [5 ]
Park, Yang Chan [6 ]
Moon, Jae Sun [1 ,2 ]
机构
[1] Korea Res Inst Biosci & Biotechnol KRIBB, Plant Syst Engn Res Ctr, Daejeon 34141, South Korea
[2] Korea Univ Sci & Technol, Dept Biosyst & Bioengn, KRIBB Sch Biotechnol, Daejeon 34113, South Korea
[3] Mongolian Natl Univ Educ, Sch Math & Nat Sci, Dept Biol, Ulaanbaatar, Mongolia
[4] Korea Inst Ind Technol KITECH, Mat & Component Convergence R&D Dept, Ansan 15588, South Korea
[5] HK Genom Inc, Daejeon, South Korea
[6] NEXBIO Co Ltd, Daejeon 34520, South Korea
关键词
D O I
10.1007/s00705-023-05921-4
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The complete nucleotide sequence of a newly discovered virus infecting Quercus aliena Blume, tentatively named "quercus leafroll virus" (QLRV), was determined through high-throughput and Sanger sequencing. The sequence comprises 3,940 nucleotides, has five open reading frames, and has a typical pelarspovirus genome organization, with neither 3' polyadenylation nor a 5' cap. The proteins encoded by QLRV share 17.9 to 44.2% amino acid sequence identity with known pelarspovirus proteins. The highest amino acid sequence identity values for the RNA-dependent RNA polymerase (RdRp) and coat protein were 67.5% and 55.2%, respectively, which are below the current thresholds for pelarspovirus species demarcation. On the basis of these results, we propose classifying QLRV as a new member of the genus Pelarspovirus, family Tombusviridae.
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页数:4
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