Comprehensive analysis reveals the prognostic and immunogenic characteristics of DNA methylation regulators in lung adenocarcinoma

被引:1
|
作者
Huang, Jing [1 ]
Huang, Chujian [2 ]
Huang, Can [3 ]
Xiang, Zichang [4 ]
Ni, Yao [4 ]
Zeng, Jian [5 ]
Cai, Songhua [2 ]
机构
[1] Sun Yat sen Univ, Sun Yat sen Mem Hosp, Dept Thorac Surg, 107 Yanjiang West Rd, Guangzhou 510120, Peoples R China
[2] Chinese Acad Med Sci & Peking Union Med Coll, Canc Hosp & Shenzhen Hosp, Natl Canc Ctr,Dept Thorac Surg, Natl Clin Res Ctr Canc, Shenzhen 518116, Peoples R China
[3] Chinese Acad Med Sci, Peking Union Med Coll, year MD program 8, Beijing 100087, Peoples R China
[4] Shenzhen Univ, Med Sch, Shenzhen 518055, Guangdong, Peoples R China
[5] Longgang Dist Cent Hosp Shenzhen, Dept Anesthesiol, Shenzhen 518116, Guangdong, Peoples R China
关键词
Lung adenocarcinoma; DNA methylation regulator; Tumor microenvironment; Prognosis; Immune response; EXPRESSION; UHRF1; NIVOLUMAB;
D O I
10.1186/s12931-024-02695-4
中图分类号
R56 [呼吸系及胸部疾病];
学科分类号
摘要
DNA methylation regulators (DMRs) play a key role in DNA methylation, thus mediating tumor occurrence, metastasis, and immunomodulation. However, the effects of DMRs on clinical outcomes and immunotherapy response remain unexplored in lung adenocarcinoma (LUAD). In this study, eight LUAD cohorts and one immunotherapeutic cohort of lung cancer were utilized. We constructed a DNA methylation regulators-related signature (DMRRS) using univariate and multivariate COX regression analysis. The DMRRS-defined low-risk group was preferentially associated with favorable prognosis, tumor-inhibiting microenvironment, more sensitivity to several targeted therapy drugs, and better immune response. Afterward, the prognostic value and predictive potential in immunotherapy response were validated. Collectively, our findings uncovered that the DMRRS was closely associated with the tumor immune microenvironment and could effectively predict the clinical outcome and immune response of LUAD patients.
引用
收藏
页数:16
相关论文
共 50 条
  • [21] DNA methylation analysis in plasma for early diagnosis in lung adenocarcinoma
    Jin, Yulin
    Lu, Rongguo
    Liu, Feng
    Jiang, Guanyu
    Wang, Ruixin
    Zheng, Mingfeng
    MEDICINE, 2024, 103 (28) : e38867
  • [22] Analysis of Chromatin Regulators Reveals Specific Features of Rice DNA Methylation Pathways
    Tan, Feng
    Zhou, Chao
    Zhou, Qiangwei
    Zhou, Shaoli
    Yang, Wenjing
    Zhao, Yu
    Li, Guoliang
    Zhou, Dao-Xiu
    PLANT PHYSIOLOGY, 2016, 171 (03) : 2041 - 2054
  • [23] Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation
    Kuang, Muyu
    Zhou, Zhenhua
    Lu, Zhongyuan
    Shen, Weina
    Ge, Haiyan
    Tao, Xiaoting
    Zhao, Yue
    Zhuge, Lingdun
    Sun, Yihua
    Ji, Dongmei
    Zhang, Huibiao
    CLINICAL RESPIRATORY JOURNAL, 2023, 17 (03): : 148 - 156
  • [24] Comprehensive Analysis of Gene Signatures of m6ARNA Methylation Regulators in Lung Adenocarcinoma and Development of a Risk Scoring System
    Gao, Chundi
    Li, Huayao
    Ma, Wenzhe
    Zhang, Qiming
    Liu, Cun
    Liu, Lijuan
    Zhuang, Jing
    Sun, Changgang
    JOURNAL OF IMMUNOLOGY RESEARCH, 2022, 2022
  • [25] Comprehensive mutanome analysis of Lewis lung cancer reveals immunogenic neoantigens for therapeutic vaccines
    Chen, Tao
    Hu, Ruiqi
    Wan, Ying
    Sun, Fengzeng
    Wang, Zichen
    Yue, Junqiu
    Chen, Jian
    Han, Guang
    Wei, Guangwei
    Dong, Zhiqiang
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2020, 525 (03) : 607 - 613
  • [26] DNA methylation profiling analysis identifies a DNA methylation signature for predicting prognosis and recurrence of lung adenocarcinoma
    Wang, Rui
    Zhu, Hong
    Yang, Mingxia
    Zhu, Chunrong
    ONCOLOGY LETTERS, 2019, 18 (06) : 5831 - 5842
  • [27] DNA methylation-based diagnostic and prognostic biomarkers of nonsmoking lung adenocarcinoma patients
    Zhang, Xiaoming
    Gao, Chundi
    Liu, Lijuan
    Zhou, Chao
    Liu, Cun
    Li, Jia
    Zhuang, Jing
    Sun, Changgang
    JOURNAL OF CELLULAR BIOCHEMISTRY, 2019, 120 (08) : 13520 - 13530
  • [28] Exploring prognostic DNA methylation genes in bladder cancer: a comprehensive analysis
    Zhang, Jianzhong
    Chen, Junyan
    Xu, Manrou
    Zhu, Tong
    DISCOVER ONCOLOGY, 2024, 15 (01)
  • [29] Integrated analysis reveals key genes with prognostic value in lung adenocarcinoma
    Song, Ying-Jian
    Tan, Juan
    Gao, Xin-Huai
    Wang, Li-Xin
    CANCER MANAGEMENT AND RESEARCH, 2018, 10 : 6097 - 6108
  • [30] Comprehensive Analysis of ABCA Family Members in Lung Adenocarcinoma with Prognostic Values
    Yanxia Yang
    Xiaoping Liu
    Xin Wang
    Jie Zhang
    Shuhua Li
    Xueping Ma
    Molecular Biotechnology, 2022, 64 : 1441 - 1453