Mutation profile of Bardet-Biedl syndrome patients from India: Implicative role of multiallelic rare variants and oligogenic inheritance pattern

被引:5
|
作者
Gnanasekaran, Harshavardhini [1 ,2 ]
Chandrasekhar, Sathya Priya [1 ]
Kandeeban, Suganya [1 ,2 ]
Periyasamy, Porkodi [1 ]
Bhende, Muna [3 ]
Khetan, Vikas [3 ]
Gupta, Neerja [4 ]
Kabra, Madhulika [4 ]
Namboothri, Sheela [5 ]
Sen, Parveen [4 ]
Sripriya, Sarangapani [1 ,6 ]
机构
[1] Vis Res Fdn, SNONGC Dept Genet & Mol Biol, Chennai, Tamilnadu, India
[2] SASTRA Univ, Sch Chem & Biotechnol, Thanjavur, Tamilnadu, India
[3] AIIMS, Dept Pediat, Div Genet, New Delhi, India
[4] Sankara Nethralaya, Shri Bhagwan Mahavir Vitreoretinal Serv, Chennai, Tamilnadu, India
[5] Amrita Inst Med Sci & Res Ctr, Dept Pediat Genet, Kochi, Kerala, India
[6] Vis Res Fdn, Dept Genet & Mol Biol, 18 Coll Rd, Chennai 600006, India
关键词
Bardet-Biedl syndrome; India; next generation sequencing; oligogenic inheritance; variation spectrum; KIDNEY-DISEASE; BBS GENES; PREDICTION; SPECTRUM; FAMILY; LZTFL1;
D O I
10.1111/cge.14398
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Bardet-Biedl syndrome (BBS), a rare primary form of ciliopathy, with heterogeneous clinical and genetic presentation is characterized by rod cone dystrophy, obesity, polydactyly, urogenital abnormalities, and cognitive impairment. Here, we delineate the genetic profile in a cohort of 108 BBS patients from India by targeted gene sequencing-based approach for a panel of ciliopathy (including BBS) and other inherited retinal disease genes. We report here a higher frequency of BBS10 and BBS1 gene variations. A different spectrum of variations including a putatively novel gene TSPOAP1, for BBS was identified. Increased percentage frequency of digenic variants (36%) in the disease cohort, role of modifiers in familial cases are some of the salient observations in this work. This study appends the knowledge of BBS genetics pertaining to patients from India. We observed a different molecular epidemiology of BBS patients in this study cohort compared to other reports, which emphasizes the need for molecular testing in affected patients.
引用
收藏
页码:443 / 460
页数:18
相关论文
共 25 条
  • [21] Mutation profile of BBS genes in Iranian patients with Bardet–Biedl syndrome: genetic characterization and report of nine novel mutations in five BBS genes
    Zohreh Fattahi
    Parvin Rostami
    Amin Najmabadi
    Marzieh Mohseni
    Kimia Kahrizi
    Mohammad Reza Akbari
    Ariana Kariminejad
    Hossein Najmabadi
    Journal of Human Genetics, 2014, 59 : 368 - 375
  • [22] A NOVEL HOMOZYGOUS PATHOGENIC BBS7 VARIANT IN A PATIENT OF HMONG ANCESTRY: CHARACTERISTICS OF BARDET-BIEDL SYNDROME IN PATIENTS FROM CHINA AND SOUTHEAST ASIA
    Haldeman-Englert, Chad
    Wilson, Carolyn
    AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2018, 176 (06) : 1490 - 1491
  • [23] Generation of induced pluripotent stem cells from a Bardet-Biedl syndrome patient carrying a homologous BBS2 c.534+1G > T mutation
    Ting, Chien-Yu
    Huang, Ching-Ying
    Chen, Hung-Chih
    Chiu, Yi-Wen
    Hsieh, Patrick C. H.
    Lee, Jia-Jung
    STEM CELL RESEARCH, 2021, 55
  • [24] Generation of a human iPSC line from a Bardet-Biedl syndrome patient compound heterozygous for the BBS7 variants c.849+1G > C/c.754G > A
    Fu, Qian
    Wang, Hui
    Zhou, Nan
    Jiang, Yeping
    Liang, Ying
    Duan, Fan
    Mi, Lan
    STEM CELL RESEARCH, 2021, 54
  • [25] Generation of induced pluripotent stem cells, KCi001-A derived from a Bardet-Biedl syndrome patient compound heterozygous for the BBS1 variants c.1169T > G/c.1135G > C
    Hey, Caroline Amalie Brunbjerg
    Saltokowa, Katarina Beata
    Larsen, Lasse Jonsgaard
    Tumer, Zeynep
    Brondum-Nielsen, Karen
    Gronskov, Karen
    Hjortshoj, Tina Duelund
    Moller, Lisbeth Birk
    STEM CELL RESEARCH, 2018, 31 : 235 - 239