RNA-seq analysis of human trabecular endothelial cells after treatment with timolol maleate

被引:1
|
作者
Palchunova, Kseniya [1 ]
Kaji, Yuichi [1 ,2 ]
Fujita, Akari [3 ]
Oshika, Tetsuro [1 ]
机构
[1] Univ Tsukuba Majors Med Sci, Dept Ophthalmol, 1-1-1 Tennoudai, Tsukuba, Ibaraki 3058575, Japan
[2] Matsumoto Eye Clin, 2-25-2F Toride I Ctr,Chuo Machi, Toride, Ibaraki 3020014, Japan
[3] Kagurazaka Eye Clin, 115 Yarai Cho Shinjyuku, Tokyo 1620805, Japan
关键词
Timolol maleate; Trabecular endothelial cells; RNA-seq; Matrix metalloproteinase; VGF nerve growth factor inducible; OPEN-ANGLE GLAUCOMA; GENE-EXPRESSION PROFILE; EXTRACELLULAR-MATRIX; AQUEOUS-HUMOR; MESHWORK; EPINEPHRINE; MECHANISM; PRESSURE;
D O I
10.1007/s10384-023-00998-5
中图分类号
R77 [眼科学];
学科分类号
100212 ;
摘要
PurposeTimolol maleate (timolol), a beta-receptor blocker, reduces intraocular pressure by decreasing aqueous humor production. Timolol reportedly also protects ganglion cells, decreases aqueous humor outflow facility, and destroys the extracellular matrix in the trabecular meshwork. In this study, we investigated the effects of timolol on cultured human trabecular endothelial cells purchased from ScienCell using next-generation sequencing.Study designExperimental investigation.MethodsTotal ribonucleic acid (RNA) was extracted after 24 h. More than 100 million RNAs in control and timolol-treated group were sequenced using a next-generation sequencer. The expression of 55,778 RNAs was analyzed.ResultsA total of 2,105 genes were significantly upregulated and 2,125 genes were downregulated, after the addition of timolol. VGF nerve growth factor inducible (VGF) (388-fold) had the maximum increase in expression, followed by amphiregulin (333-fold), a member of the epidermal growth factor family. Moreover, the expression of extracellular matrix-degrading enzymes, matrix metalloproteinases (MMPs) 1, 2, 3, 10, 12, and 14, increased.ConclusionTimolol exerts various effects on human trabecular endothelial cells. The increase in MMP expression may contribute to the decrease in the aqueous humor outflow facility.
引用
收藏
页码:440 / 447
页数:8
相关论文
共 50 条
  • [41] Single-cell RNA-seq analysis of human CSF microglia and myeloid cells in neuroinflammation
    Esaulova, Ekaterina
    Cantoni, Claudia
    Shchukina, Irina
    Zaitsev, Konstantin
    Bucelli, Robert C.
    Wu, Gregory F.
    Artyomov, Maxim N.
    Cross, Anne H.
    Edelson, Brian T.
    NEUROLOGY-NEUROIMMUNOLOGY & NEUROINFLAMMATION, 2020, 7 (04):
  • [42] Interoperable RNA-Seq analysis in the cloud
    Lachmann, Alexander
    Clarke, Daniel J. B.
    Torre, Denis
    Xie, Zhuorui
    Ma'ayan, Avi
    BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2020, 1863 (06):
  • [43] RNA-Seq Expression Analysis of Enteric Neuron Cells with Rotenone Treatment and Prediction of Regulated Pathways
    Guan, Qiang
    Wang, Xijin
    Jiang, Yanyan
    Zhao, Lijuan
    Nie, Zhiyu
    Jin, Lingjing
    NEUROCHEMICAL RESEARCH, 2017, 42 (02) : 572 - 582
  • [44] Single Cell RNA-seq Analysis Of Microglia And Myeloid Cells In Human Cerebrospinal Fluid In Neuroinflammation
    Edelson, B. T.
    Esaulova, E.
    Cantoni, C.
    Shchukina, I.
    Zaitsev, K.
    Bucelli, R. C.
    Wu, G. F.
    Artyomov, M.
    Cross, H.
    MULTIPLE SCLEROSIS JOURNAL, 2020, 26 (1_SUPPL) : 124 - 124
  • [45] RNA-Seq Expression Analysis of Enteric Neuron Cells with Rotenone Treatment and Prediction of Regulated Pathways
    Qiang Guan
    Xijin Wang
    Yanyan Jiang
    Lijuan Zhao
    Zhiyu Nie
    Lingjing Jin
    Neurochemical Research, 2017, 42 : 572 - 582
  • [46] Mechanistic Targets of Diallyl Trisulfide in Human Breast Cancer Cells Identified by RNA-seq Analysis
    Hahm, Eun-Ryeong
    Kim, Su-Hyeong
    Mathan, Sivapar V.
    Singh, Rana P.
    Singh, Shivendra V.
    JOURNAL OF CANCER PREVENTION, 2021, 26 (02) : 128 - 136
  • [47] RNA-seq characterization of mouse and human glia
    He, Y.
    Yao, X.
    Taylor, N.
    Bhattacharya, A.
    GLIA, 2017, 65 : E232 - E232
  • [48] Coupled single-cell and bulk RNA-seq analysis reveals the engulfment role of endothelial cells in atherosclerosis
    Xu, Jianxiong
    Wang, Jinxuan
    Zhang, Hongping
    Chen, Yidan
    Zhang, Xiaojuan
    Zhang, Ying
    Xie, Ming
    Xiao, Jun
    Qiu, Juhui
    Wang, Guixue
    GENES & DISEASES, 2024, 11 (05)
  • [49] Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome
    Peng, Zhiyu
    Cheng, Yanbing
    Tan, Bertrand Chin-Ming
    Kang, Lin
    Tian, Zhijian
    Zhu, Yuankun
    Zhang, Wenwei
    Liang, Yu
    Hu, Xueda
    Tan, Xuemei
    Guo, Jing
    Dong, Zirui
    Liang, Yan
    Bao, Li
    Wang, Jun
    NATURE BIOTECHNOLOGY, 2012, 30 (03) : 253 - +
  • [50] Approaches for sRNA Analysis of Human RNA-Seq Data: Comparison, Benchmarking
    Bezuglov, Vitalik
    Stupnikov, Alexey
    Skakov, Ivan
    Shtratnikova, Victoria
    Pilsner, J. Richard
    Suvorov, Alexander
    Sergeyev, Oleg
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (04)