Critique of "A Parallel Framework for Constraint-Based Bayesian Network Learning via Markov Blanket Discovery" by SCC Team From ShanghaiTech University

被引:1
|
作者
Li, Guancheng [1 ]
Cao, Songhui [1 ]
Zhao, Chuyi [1 ]
Zhang, Siyuan [1 ]
Ji, Yuchen [1 ]
Jing, Haotian [1 ]
Li, Zecheng [1 ]
Cheng, Jiajun [1 ]
Yang, Yiwei [1 ]
Yin, Shu [1 ]
机构
[1] ShanghaiTech Univ, Sch Informat Sci & Technol, Shanghai 201210, Peoples R China
关键词
Noise measurement; Benchmark testing; Bayes methods; Task analysis; Nonvolatile memory; Graphics processing units; Biological system modeling; Case studies in scientific applications; usability testing;
D O I
10.1109/TPDS.2022.3205479
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
In SC20, (Srivastava et al. 2020) proposed a Parallel Framework for Bayesian Learning, or ramBLe, for short, which is a highly parallel and efficient framework for learning the structure of Bayesian Networks (BNs) from samples, particularly large genome-scale networks. As part of our participation in the SC21 Student Cluster Competition, our task was to verify conclusions from the original work (Srivastava et al. 2020). Here we present the outcome of our experiments, which were performed on a four-node cluster from the Oracle Cloud HPC platform. We reproduce the numerical results from (Srivastava et al. 2020), namely the algorithm's performance and scaling behavior using MPI and different Python and Boost libraries on the Oracle cloud.
引用
收藏
页码:1716 / 1719
页数:4
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