Artificial neural network modeling on the polymer-electrolyte aqueous two-phase systems involving biomolecules

被引:14
|
作者
Chen, Yuqiu [1 ]
Liang, Xiaodong [1 ]
Kontogeorgis, Georgios M. [1 ]
机构
[1] Tech Univ Denmark, Dept Chem & Biochem Engn, DK-2800 Lyngby, Denmark
基金
欧盟地平线“2020”; 欧洲研究理事会;
关键词
Biomolecule separation and purification; Aqueous two-phase systems (ATPS); Modeling; Electrolytes; Artificial neural network; LIQUID-LIQUID EQUILIBRIUM; GLYCOL DIMETHYL ETHER; UNIFAC GROUP-CONTRIBUTION; POLYOXYETHYLENE LAURYL ETHER; DIFFERENT TEMPERATURES EXPERIMENT; DIPOTASSIUM HYDROGEN PHOSPHATE; ASSOCIATING FLUID THEORY; BOVINE SERUM-ALBUMIN; PLUS WATER-SYSTEMS; POLY(ETHYLENE GLYCOL);
D O I
10.1016/j.seppur.2022.122624
中图分类号
TQ [化学工业];
学科分类号
0817 ;
摘要
Polymer-electrolyte aqueous two-phase systems (ATPS) have demonstrated their superior performance in the separation and purification of high-value biomolecules. However, these powerful platforms are still a major academic curiosity, without their acceptance and implementation by industry. One of the major obstacles is the absence of models to predict the partition of biomolecules in ATPS in an easy and predictive way. To address this limitation, modelling studies on the binodal curve behavior of polymer-electrolyte ATPS and the partitioning of biomolecules in these aqueous electrolyte solutions are carried out in this work. First, a comprehensive database targeting the studied systems is established. In total, 11,998 experimental binodal data points covering 276 polymer-electrolyte ATPS at different temperatures (273.15 K-399.15 K) and 626 experimental partition data points involving 22 biomolecules in 42 polymer-electrolyte ATPS at different temperatures (283.15 K-333.15 K) are included. Then, a novel modeling strategy that combines a well-known machine learning algorithm, i.e., artificial neural network (ANN) and group contribution (GC) method is proposed. Based on this modeling strategy, an ANN-GC model (ANN-GC model1) is built to describe the binodal curve behavior of polymer-electrolyte ATPS, while another ANN-GC model (ANN-GC model2) is developed to predict the partition of biomolecules in these biphasic systems. ANN-GC model1 gives a mean absolute error (MAE) of 0.0132 and squared correlation coefficient (R-2) of 0.9878 for the 9,598 training data points, and for the 1,200 validation data points they are 0.0141 and 0.9858, respectively. Meanwhile, it also gives a MAE of 0.0143 and R-2 of 0.9846 for the 1,200 test data points. On the other hand, ANN-GC model2 gives root-mean-square deviation (RMSD) of 0.0577 for 501 training data points, and for the 62 validation data points and 63 test data points their RMSD are 0.0849 and 0.0885, respectively. Furthermore, the obtained results also indicate that the tie-line length of polymer-electrolyte ATPS calculated from ANN-GC model1 can be directly used in ANN-GC model2 for predicting the partition performance coefficient of biomolecules in these ATPS. The developed models offer the possibility to predict the partition of biomolecules in ATPS without any requirement of experimental data. Based on the developed ANN-GC models, some high-performance ATPS are identified to partition four well-known biomolecules.
引用
收藏
页数:15
相关论文
共 50 条
  • [41] Acoustic field assisted demixing of aqueous two-phase polymer systems
    Srinivas, ND
    Nagaraj, N
    Raghavarao, KSMS
    BIOSEPARATION, 2001, 10 (4-5) : 203 - 210
  • [42] Analysis of the electrostatic potential difference in aqueous polymer two-phase systems
    Technische Hochschule Darmstadt, Darmstadt, Germany
    Fluid Phase Equilib, 1-2 (305-315):
  • [43] Modeling of phase separation in PEG-salt aqueous two-phase systems
    Kenkare, PU
    Hall, CK
    AICHE JOURNAL, 1996, 42 (12) : 3508 - 3522
  • [44] Solvent properties governing protein partitioning in polymer/polymer aqueous two-phase systems
    Madeira, Pedro P.
    Reis, Celso A.
    Rodrigues, Alirio E.
    Mikheeva, Larissa M.
    Chait, Arnon
    Zaslavsky, Boris Y.
    JOURNAL OF CHROMATOGRAPHY A, 2011, 1218 (10) : 1379 - 1384
  • [45] Process development for the extraction of biomolecules Application for downstream processing of proteins in aqueous two-phase systems
    Eggersgluess, Jan K.
    Both, Simon
    Strube, Jochen
    CHIMICA OGGI-CHEMISTRY TODAY, 2012, 30 (04) : 32 - 36
  • [46] Precisely targeted delivery of cells and biomolecules within microchannels using aqueous two-phase systems
    Frampton, John P.
    Lai, David
    Sriram, Hari
    Takayama, Shuichi
    BIOMEDICAL MICRODEVICES, 2011, 13 (06) : 1043 - 1051
  • [47] Precisely targeted delivery of cells and biomolecules within microchannels using aqueous two-phase systems
    John P. Frampton
    David Lai
    Hari Sriram
    Shuichi Takayama
    Biomedical Microdevices, 2011, 13 : 1043 - 1051
  • [48] Microfluidics with aqueous two-phase systems
    Hardt, Steffen
    Hahn, Thomas
    LAB ON A CHIP, 2012, 12 (03) : 434 - 442
  • [49] Controlling Macroscopic Phase Separation of Aqueous Two-Phase Polymer Systems in Porous Media
    Pereira, David Y.
    Wu, Chloe M.
    Lee, So Youn
    Lee, Eumene
    Wu, Benjamin M.
    Kamei, Daniel T.
    SLAS TECHNOLOGY, 2019, 24 (05): : 515 - 526
  • [50] Optimisation of Aqueous Two-Phase Systems
    Chandler, Emma
    Falconer, Robert
    Brown, Solomon
    29TH EUROPEAN SYMPOSIUM ON COMPUTER AIDED PROCESS ENGINEERING, PT A, 2019, 46 : 283 - 288