Genome-wide identification of glutamate receptor-like gene family in soybean

被引:2
|
作者
Li, Xinran [1 ]
Zhu, Tianhao [2 ]
Wang, Xuying [1 ]
Zhu, Miao [1 ,3 ]
机构
[1] Liupanshui Normal Univ, Sch Biol Sci & Technol, Liupanshui, Peoples R China
[2] Harbin Engn Univ, Coll Math Sci, Harbin, Peoples R China
[3] Liupanshui Normal Univ, 288 Minghu Rd, Liupanshui City, Guizhou, Peoples R China
关键词
Soybean; Glutamate receptor -like gene; Feature analysis; Expression analysis; ARABIDOPSIS; EVOLUTION; PLANTS; DUPLICATION; CHANNELS; ELEMENTS; DATABASE;
D O I
10.1016/j.heliyon.2023.e21655
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Glutamate receptor-like genes (GLRs) are essential in the growth and development of plants and many physiological and biochemical processes; however, related information in soybean is lacking. In this study, 105 GLRs, including 67 Glycine soja and 38 Glycine max GLRs, were identified and divided into two clades (Clades II and III) according to their phylogenetic re-lationships. GLR members in the same branch had a relatively conservative motif composition and genetic structure. Furthermore, the soybean GLR family mainly experienced purification selection during evolution. Cis-acting element analysis, gene ontology, and Kyoto Encyclopedia of Genes and Genomic annotations indicated the complexity of the gene regulation and functional diversity of the soybean GLR. Moreover, transcriptome data analysis showed that these GLRs had different expression profiles in different tissues, and Clade III members had higher and more common expression patterns. Additionally, the expression profiles under jasmonic acid treatment and salt stress indicate that the GLR participated in the jasmonic acid signaling pathway and plays a role in salt treatment. This study provides information for a comprehensive understanding of the soybean GLR family and a reference for further functional research and genetic improvement.
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页数:16
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