Development of Ferroptosis-Associated ceRNA Network in Periodontitis

被引:12
|
作者
Zhang, Churen [1 ,3 ]
Xue, Pengxin [2 ]
Ke, Jianguo [1 ]
Cai, Qiaoling [1 ,3 ]
机构
[1] Xiamen Univ, Affiliated Hosp 1, Sch Med, Dept Stomatol, Xiamen, Peoples R China
[2] Shanghai Jiao Tong Univ, People s Hosp 9, Shanghai, Peoples R China
[3] 55 Zhenhai Ave, Xiamen 361003, Peoples R China
关键词
Ferroptosis; Periodontitis; ceRNA network; Noncoding RNA; CELL-DEATH; PROGRESSION; DISEASES; GENES;
D O I
10.1016/j.identj.2022.05.004
中图分类号
R78 [口腔科学];
学科分类号
1003 ;
摘要
Objectives: Periodontitis is a chronic inflammatory illness that may lead to tooth loosening and even loss, and its pathogenesis is not fully understood. Ferroptosis is an iron -depen-dent, regulated cell death. The present study aims to find the key ferroptosis-related genes (FRGs) in periodontitis and develop an mRNA-miRNA-lncRNA network to deeply explore the pathogenesis of periodontitis. Methods: Data from the Gene Expression Omnibus (GEO) database and FerrDb database were downloaded to discover the differentially expressed mRNA, miRNA, and FRGs. Func-tional enrichment analysis was conducted for the differentially expressed FRGs (DE-FRGs), including gene ontology, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, and protein-protein interaction (PPI) network analysis. Targetscan and miRtarbase were used to estimate the miRNAs that DE-FRGs may interact with, whilst StarBase v3.0 was used for lncRNA-miRNA interaction.Results: Seven DE-FRGs were identified through differential expression analysis. Interleukin 1 beta (IL1B) interacted with XBP1 and MMP13 in the PPI network. After taking the intersec-tion between DE-miRNAs and predicted miRNAs, a ceRNA network containing IL1B, has-miR-185, has-miR-204, has-miR-211, has-miR-4306, and 28 lncRNAs was established. Conclusions: Seven FRGs in periodontitis were identified, which might promote deeper understanding of ferroptosis in periodontitis.CO 2022 The Authors. Published by Elsevier Inc. on behalf of FDI World Dental Federation. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/)
引用
收藏
页码:186 / 194
页数:9
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