A novel cuproptosis-related lncRNA signature predicts prognosis and therapeutic response in bladder cancer

被引:4
|
作者
Cai, Jinming [1 ,2 ]
Xie, Haoran [3 ]
Yan, Yilin [1 ]
Huang, Zhengnan [1 ]
Tang, Pengfei [4 ]
Cao, Xiangqian [1 ]
Wang, Zeyi [4 ]
Yang, Chenkai [1 ]
Wen, Jiling [2 ]
Tan, Mingyue [5 ]
Zhang, Fang [1 ]
Shen, Bing [1 ]
机构
[1] Shanghai Jiao Tong Univ, Shanghai Gen Hosp, Dept Urol, Sch Med, Shanghai, Peoples R China
[2] Tongji Univ, Shanghai East Hosp, Dept Urol, Sch Med, Shanghai, Peoples R China
[3] Shanghai Jiao Tong Univ, Shanghai Gen Hosp, Dept Gastroenterol, Sch Med, Shanghai, Peoples R China
[4] Nanjing Med Univ, Dept Urol, Shanghai Gen Hosp, Shanghai, Peoples R China
[5] Shanghai Univ Tradit Chinese Med, Shuguang Hosp, Dept Urol, Shanghai, Peoples R China
关键词
cuproptosis; bladder cancer; lncRNAs; immunotherapy; survival analysis; URINARY; PROLIFERATION; IMMUNOTHERAPY; REVEALS; ZN; SE; CU;
D O I
10.3389/fgene.2022.1082691
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Bladder cancer (BC) ranks the tenth in the incidence of global tumor epidemiology. LncRNAs and cuproptosis were discovered to regulate the cell death. Herein, we downloaded transcriptome profiling, mutational data, and clinical data on patients from The Cancer Genome Atlas (TCGA). High- and low-risk BC patients were categorized. Three CRLs (AL590428.1, AL138756.1 and GUSBP11) were taken into prognostic signature through least absolute shrinkage and selection operator (LASSO) Cox regression. Worse OS and PFS were shown in high-risk group (p < 0.05). ROC, independent prognostic analyses, nomogram and C-index were predicted via CRLs. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis indicated IncRNAs play a biological role in BC progression. Immune-related functions showed the high-risk group received more benefit from immunotherapy and had stronger immune responses, and the overall survival was better (p < 0.05). Finally, a more effective outcome (p < 0.05) was found from clinical immunotherapy via the TIDE algorithm and many potential anti-tumor drugs were identified. In our study, the cuproptosis-related signature provided a novel tool to predict the prognosis in BC patients accurately and provided a novel strategy for clinical immunotherapy and clinical applications.
引用
收藏
页数:14
相关论文
共 50 条
  • [41] A novel cuproptosis-related gene signature to predict prognosis in Glioma
    Zhang, Mengyang
    Liu, Xiaobai
    Wang, Di
    Ruan, Xuelei
    Wang, Ping
    Liu, Libo
    Xue, Yixue
    BMC CANCER, 2023, 23 (01)
  • [42] A novel cuproptosis-related gene signature to predict prognosis in Glioma
    Mengyang Zhang
    Xiaobai Liu
    Di Wang
    Xuelei Ruan
    Ping Wang
    Libo Liu
    Yixue Xue
    BMC Cancer, 23
  • [43] Construction and validation of a cuproptosis-related lncRNA signature for the prediction of the prognosis of LUAD and LUSC
    Wang, Yu
    Xiao, Xu
    Li, Yan
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [44] Construction and validation of a cuproptosis-related lncRNA signature for the prediction of the prognosis of LUAD and LUSC
    Yu Wang
    Xu Xiao
    Yan Li
    Scientific Reports, 13
  • [45] A cuproptosis-related lncRNA signature to predict prognosis and immune microenvironment of colon adenocarcinoma
    Li, Dongming
    Qu, Guangzhen
    Ling, Shen
    Sun, Yuanlin
    Cui, Yingnan
    Yang, Yingchi
    Cao, Xueyuan
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [46] A cuproptosis-related lncRNA signature to predict prognosis and immune microenvironment of colon adenocarcinoma
    Dongming Li
    Guangzhen Qu
    Shen Ling
    Yuanlin Sun
    Yingnan Cui
    Yingchi Yang
    Xueyuan Cao
    Scientific Reports, 13
  • [47] A novel cuproptosis-related subtypes and gene signature associates with immunophenotype and predicts prognosis accurately in neuroblastoma
    Tian, Xiao-Mao
    Xiang, Bin
    Yu, Yi-Hang
    Li, Qi
    Zhang, Zhao-Xia
    Zhanghuang, Chenghao
    Jin, Li-Ming
    Wang, Jin-Kui
    Mi, Tao
    Chen, Mei-Lin
    Liu, Feng
    Wei, Guang-Hui
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [48] A cuproptosis-related signature for predicting the prognosis of gastric cancer br
    He, Chunmei
    Zhang, Hao
    Guo, Zehao
    Mo, Zhijing
    JOURNAL OF GASTROINTESTINAL ONCOLOGY, 2023, 14 (01) : 146 - +
  • [49] A cuproptosis-related lncRNA signature predicts the prognosis and immune cell status in head and neck squamous cell carcinoma
    Zheng, Xiwang
    Zheng, Defei
    Zhang, Chunming
    Guo, Huina
    Zhang, Yuliang
    Xue, Xuting
    Shi, Zhaohui
    Zhang, Xiangmin
    Zeng, Xianhai
    Wu, Yongyan
    Gao, Wei
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [50] A cuproptosis-related signature predicts prognosis and indicates cross-talk with immunocyte in ovarian cancer
    Yang, Bikang
    Yang, Juan
    Zhang, Keqiang
    DISCOVER ONCOLOGY, 2024, 15 (01)